Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2570 ATGGGTGGGAATTCGCCTTGCGCTTCATGCAAATTGCTGAGACGCCGATGCGCTAGAGACTGCATTTTCGCACCCTATTTCCCTTCCGATGACCCCCAAAAGTTCGCCATCGTTCACAAGGTTTTCGGCGCTAGCAATGTTAGCAAGATGCTCCAGGAGCTTCCGGTTCAGCAAAGAGCGGATGCGGTGAGCAGTCTAGTGTACGAAGCAAACGCAAGAATGAGGGACCCAGTTTATGGATGTGTGGGAGCCATATCGTATCTGCAGAACCAGGTTTCGGAGCTTCAGATGCAGCTTGCGGTAGCGCAGGCAGAGATCCTGTGCATCCAGATGCAGAATGAGCCTGCTGTAGTCACCATGCCACCTAACCCACAACTCGAACTCGATCCTCTTCCTCCTCATCACAATCACAAATCTTACTTTCTCCAAAACGAACTCCCTCATCAGTACCTTAACTTCGCTTCTTCCAGCAATGTAATTCACCATGACATGGTTTCTTGA 501 0.501 MGGNSPCASCKLLRRRCARDCIFAPYFPSDDPQKFAIVHKVFGASNVSKMLQELPVQQRADAVSSLVYEANARMRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMQNEPAVVTMPPNPQLELDPLPPHHNHKSYFLQNELPHQYLNFASSSNVIHHDMVS 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2570 166 Coils Coil 85 105 - -
Sto9g2570 166 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Sto9g2570 166 PANTHER LOB DOMAIN-CONTAINING PROTEIN 12-LIKE 2 133 - -
Sto9g2570 166 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Sto9g2570 166 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2570 Sto-Chr9 28263793 28264395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2570 3 142 AS2 family AT2G30130 79.286 8.56e-75 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto9g2570 LOB 9.8e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2570 - - zju:107413913 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2570 9 28263793 28264395 Sto9g2570 9 28263793 28264395 ECH