Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2567 ATGGCTCCCAACCTCGAATGTCGCATGTACGAGGCCAAGTACCCGGAAGTAGGCATGGCCGTCATGATACAGTTGAAGAGCATTTCCGAAACGAGCGCCTACGTCTCATTGCTCGAGTACGACAACATCGAGGGCATGATCTTGTTCTCCGAGCTATCTCGCCGTCTGATTCGTGGTGTTCGCAGCATCATTAAGGTGAGTCACCCCGAGCCTGTCATGGTCCTCAGGGTCGACGAGGACAAGGGCTACATCGATTTGAGCAAGCGAAGGGTCACTGAAGAGGATATTGAGGCTTGCGTGGAGAGGTACGACAAGAGCAAACTTGTTCACTCCATTATGCGCCACGTTGCTGAGGCTATGGATATCGATTTAGAGGAATTGTATATTCACATTGGATGGCCTTTATATCGCAAATATGGTCATGCTTTTGAGgcttttaaaataattgtcaGGGATCCTGATTCAGTTTTGAATTCCCTCACCCGTGAAGTCAAGGACCCAGATGGAAAGGAGGCAACCAAGGTGGTGCCAGCGGTGTCAGGAGAATTGAAGAAAGCTCTGGTAAAGAATATTCAAAGAAGAATGACACCACAACCCGTGAAAATAAGGGCAGATATTGAAATGAAATGTTTTCATTTTGATGGAGTTCTTCACATTAAGGAGGCTATGCGGAGAGCGGAAGCTGCAGGAAATAATGATTGCCCTGTAAAATTTAAACTTGTTGCTCCTCCACTATATGTTCTTACCACTCAAACTCTTGACAAGGAGCAAGGAATATTAGTTCTCAACAATGCTATTATTGCTTGCACTGAAGCAATAGAGCAACACAAGGGTCAACTTGCTGTAAAGGAGGCACCGAGCGCAGTGAGTATTCATGAGGCTTTGAAGTCAAGGAGGCACATGGAGCACAGGGAAAGGCATTTTGACAGTACAGAGGATAATCAGATGTTCTACCAGGACACCAAGCATTGGTCTCAACTAGTGTCAGATGTTTATGCCGATGGTCTTTCTATAAATTGGCCAAGCGTGCGGAATGTAATGGACATGAATGCTGGTTATGGAGGCTTCCTCTTCAAGAATCTTGAGAAAAGGTATGACCATGGCATGTTCTTTTACCTCATTTTATTCTATATAACTTCCATCAGTTTCAAATGTGACATTGTGGATGTGGTTGCGGAGGTAGATCGCATATTGAGACCAGATGGATATCTTGTGGTTCAAGACTCCTTGGAAGTGATTAGCAAACTGAGTCCAATCTTGCTTTCACTTAATTGGTCTGTAACTTTACATCAAAATCAGTTTCTTGTCAGTCAAAAGAGTTTCTGGCGTCCCTAG 1335 0.4412 MAPNLECRMYEAKYPEVGMAVMIQLKSISETSAYVSLLEYDNIEGMILFSELSRRLIRGVRSIIKVSHPEPVMVLRVDEDKGYIDLSKRRVTEEDIEACVERYDKSKLVHSIMRHVAEAMDIDLEELYIHIGWPLYRKYGHAFEAFKIIVRDPDSVLNSLTREVKDPDGKEATKVVPAVSGELKKALVKNIQRRMTPQPVKIRADIEMKCFHFDGVLHIKEAMRRAEAAGNNDCPVKFKLVAPPLYVLTTQTLDKEQGILVLNNAIIACTEAIEQHKGQLAVKEAPSAVSIHEALKSRRHMEHRERHFDSTEDNQMFYQDTKHWSQLVSDVYADGLSINWPSVRNVMDMNAGYGGFLFKNLEKRYDHGMFFYLILFYITSISFKCDIVDVVAEVDRILRPDGYLVVQDSLEVISKLSPILLSLNWSVTLHQNQFLVSQKSFWRP 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2567 444 PANTHER BNAC04G04870D PROTEIN 2 302 - -
Sto9g2567 444 SUPERFAMILY eIF2alpha middle domain-like 91 194 IPR024054 -
Sto9g2567 444 Gene3D Translation initiation factor 2; subunit 1; domain 2 92 194 IPR024054 -
Sto9g2567 444 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 2 302 IPR011488 GO:0003723|GO:0003743
Sto9g2567 444 SUPERFAMILY Nucleic acid-binding proteins 7 89 IPR012340 -
Sto9g2567 444 CDD S1_IF2_alpha 15 90 IPR044126 GO:0003723
Sto9g2567 444 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 379 433 IPR004159 GO:0008168
Sto9g2567 444 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 309 356 IPR004159 GO:0008168
Sto9g2567 444 Pfam S1 RNA binding domain 16 89 IPR003029 GO:0003676
Sto9g2567 444 Gene3D - 3 91 IPR012340 -
Sto9g2567 444 SUPERFAMILY eIF-2-alpha, C-terminal domain 198 307 IPR024055 -
Sto9g2567 444 SMART S1_6 16 89 IPR022967 -
Sto9g2567 444 Gene3D EIF_2_alpha 199 318 IPR024055 -
Sto9g2567 444 Pfam Eukaryotic translation initiation factor 2 alpha subunit 127 255 IPR011488 GO:0003723|GO:0003743
Sto9g2567 444 ProSiteProfiles S1 domain profile. 18 89 IPR003029 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2567 Sto-Chr9 28234308 28243891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2567 2 290 Eukaryotic Initiation Factors Gene Family AT5G05470 73.883 1.13e-149 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2567 K03237 - mnt:21390344 482.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2567 9 28234308 28243891 Sto5g1480 5 10180914 10184596 ECH
Sto9g2567 9 28234308 28243891 Sto9g2567 9 28234308 28243891 ECH