Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2564 TTGCCAGACCCTCCTTCACCGGCTCCATCTGCATTGGAAATACCCCCATCTGCCTCTGGAATATCATCTAAAAGTCCCTCTTCAAAGAAGCGGAAAGTTGCAATTTTAGCAGGATCTATAGGTGGCATTGTAGttcttcttattttaatcattgGTTATCTCTTTAAAACCAATAAGATAGCTACTGTCAAACCTTGGGCCACAGGATTAAGTGGACAGCTTCAGAAGGCATTTGTAACAGGTGCGCAAAAGCTAAAGAGATCAGAGCTTGAAGCAGCATGTGAAGATTTTAGTAATGTAATTTGTACTTCACCTACTGGTACACTGTACAAGGGGACTTTATCTAGTGGTGTTGAAATCGCTGTGGCGTCTGTTACAGTGACATCATCCAAAGATTGGTCAAAGAGTTCAGAAGTGAAGTTCAGGAAGAAGATAGATACATTGTCAAAAGTGAATCACAAAAATTTTGTCAATCTTCTTGGAtattgtgaagaagaagagccTTTCACTAGAATGGTGGTTTTTGAATATGCCCCTAATGGGACACTCTTTGAGCACTTACACGTAAAAGAAACTGAGCACTTGGATTGGATAACAAGACTTAGAATTGCAATGGGTATGGCTTACTGTCTACAACATATGCACCAGTCGAAGCCTCCTATAGCCCATAGTAATCTGAACTCTTCATCTGTCCTTCTCACTGATGACTACGCAGCCAAAATCTCAGATTTGAGTTTCTTGAATGGAATAGGTTCGAGTGAGACAAAATCAGGTGGCAGAAAACACAATGGTGTGCCATTAGCAACTCCAGAAAGTAACATTTATAGCTTTGGTGTTATGTTACTTGAAATTGTAACAGGAAGGCATCCTTATTCAGAAGATAATAATGGCTCACTTCAAGATTGGGCGTCCAACTTTTTGCGAGGGAATAGACCCCTGAGAGAAATAGTGGATCCAACTCTAGCATCTTTCCAAGCAGAGCAATTGGAGCGAATTGCTGATTTAATTAAATCTTGTATTCATCCTGACACAAAGCAGAGACCAAAAATGAATGAAATCTGTGAGAGATTGAGGGAGATAACaaaaataacacctgatgcagCAGTTCCTAAACTTAATTCACTTTGGTGGGCAGAGCTTGAGATTTGTTCTGCAGATGGAAGCTGA 1167 0.3856 LPDPPSPAPSALEIPPSASGISSKSPSSKKRKVAILAGSIGGIVVLLILIIGYLFKTNKIATVKPWATGLSGQLQKAFVTGAQKLKRSELEAACEDFSNVICTSPTGTLYKGTLSSGVEIAVASVTVTSSKDWSKSSEVKFRKKIDTLSKVNHKNFVNLLGYCEEEEPFTRMVVFEYAPNGTLFEHLHVKETEHLDWITRLRIAMGMAYCLQHMHQSKPPIAHSNLNSSSVLLTDDYAAKISDLSFLNGIGSSETKSGGRKHNGVPLATPESNIYSFGVMLLEIVTGRHPYSEDNNGSLQDWASNFLRGNRPLREIVDPTLASFQAEQLERIADLIKSCIHPDTKQRPKMNEICERLREITKITPDAAVPKLNSLWWAELEICSADGS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2564 388 Pfam Protein tyrosine and serine/threonine kinase 104 357 IPR001245 GO:0004672|GO:0006468
Sto9g2564 388 MobiDBLite consensus disorder prediction 1 26 - -
Sto9g2564 388 Gene3D Phosphorylase Kinase; domain 1 67 177 - -
Sto9g2564 388 PANTHER PROTEIN MALE DISCOVERER 2 13 387 - -
Sto9g2564 388 Gene3D Transferase(Phosphotransferase) domain 1 178 370 - -
Sto9g2564 388 ProSiteProfiles Protein kinase domain profile. 95 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2564 388 SUPERFAMILY Protein kinase-like (PK-like) 82 357 IPR011009 -
Sto9g2564 388 PANTHER BNAA09G55080D PROTEIN 13 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2564 Sto-Chr9 28223449 28225097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2564 74 380 Receptor kinase-like Gene Family AT5G65700 31.818 2.31e-41 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Sto9g2564 PK_Tyr_Ser-Thr 5.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2564 - - gmx:100807163 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2564 9 28223449 28225097 Sto9g2564 9 28223449 28225097 ECH