Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2559 ATGAAGGGGTATGAGCCCCGTTCGAGCTCTTCCTGTGCGGCCTGCAAGCTATTGAAGAGAAGATGCACAGCCAATTGTATATTCGCGCCGTACTTCCGGTCGGACGAGTGCAAGAAATTCGCCAAGGTTCACAAGGTGTTCGGAGCCAGCAACGTAAGCAAGATCCTCGTGGAAGTTCCGGAAGATCAGAGGGAGGACACGGTGAATTCGCTGGCGTACGAGGCGGAGGCGAGGCTGAAGGACCCTGTCTATGGATGCATTGGAGCCATAGCTCTATTGCAAAGGAAGATGGCTGAGCTTCAACATGACTTAGCAATTGCCAAGGCTCGTCTGGCTCGTTATGCGGCTGCGTCTGCCTCTGCTTCGGCTTCGGCTTCTTCCTCTGATATGATGTTCAATAATGCCAGTAATAATGTGGGATTGCCTCCTTTCCCATCTGACGTTGACTTTTCTACTTGCTGTGATTTCAATGATACCTTCTGTCACACTcacacctcttcttcttcttctcaagtTCTGTTGGGGCGGAATGAGACGGTCGATGATTTTATTCAAAtcccatatatattttga 573 0.4677 MKGYEPRSSSSCAACKLLKRRCTANCIFAPYFRSDECKKFAKVHKVFGASNVSKILVEVPEDQREDTVNSLAYEAEARLKDPVYGCIGAIALLQRKMAELQHDLAIAKARLARYAAASASASASASSSDMMFNNASNNVGLPPFPSDVDFSTCCDFNDTFCHTHTSSSSSQVLLGRNETVDDFIQIPYIF 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2559 190 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 1 160 - -
Sto9g2559 190 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Sto9g2559 190 Coils Coil 90 117 - -
Sto9g2559 190 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Sto9g2559 190 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2559 Sto-Chr9 28196723 28197295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2559 1 144 AS2 family AT3G11090 60.976 1.11e-65 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto9g2559 LOB 1.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2559 - - gmx:100777635 271.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2559 9 28196723 28197295 Sto9g2559 9 28196723 28197295 ECH