Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2558 ATGGACCGCCCGAACCCGAATCGGTCCCGTCCCGGTGGCGGCAGAGAGGATTGTTGGAGCGAAGGTGCCACGGAGACCTTGATCGAGGCCTGGGGTGATCGTTATATCCAGCTCCATCGTGGTAATCTCCGTCAGAAGGACTGGAACGACGTCGCCAATGCTGTTAACGCCCGTCAAGGCGGCGTCAAGTCTCGCAAGACCGACGTTCAGTGCAAATACAGGATCGACACGCTCAAGAAGAAGTATAAGGTCGAGAAGAACAAGCCGCCTCCGTCCAAGTGGGTCTTCTATCATCGTCTTGATTATCTGGTAGGGGGTAGCGTTCTCACTGACAAGGATAAATCTACGACCCTTACATCGAATGTCAAGCCCTCGAAGCCCAAGCTCAGCGCAAGTCCGATGATTGGACCCGCTCCAGCGCTGTATTCGGGTGCGTCTTCGAGGTTGGACTCTGGCGGGGGTTCTGTGGAGAGTTCACTTGGGGAAGACGATGACGAAGATGATGTAGGGTTTGATGGGAGAACAGTGAGGAAGCAAAGGTTGGAGACGGTCGATTTTTCTGAAGGAGCTGCGTTTAGGGAATTAGCTAGGGCGATTCTCAAGTTTGGGGAGATTTATGAGAGGATCGAGAGCTCAAAGCAGCAGCAGATGATGGAGTTGGAGAAGCAGAGACTGGAGTTTACTAAGGATCTCGAGTTTCAAAGAATGAATATGTTCATGGATACTCAATTGGAAGTCGAGAGAATGAAACGCCCCAAGTATGCCAACACCTCAAGTTAG 780 0.5179 MDRPNPNRSRPGGGREDCWSEGATETLIEAWGDRYIQLHRGNLRQKDWNDVANAVNARQGGVKSRKTDVQCKYRIDTLKKKYKVEKNKPPPSKWVFYHRLDYLVGGSVLTDKDKSTTLTSNVKPSKPKLSASPMIGPAPALYSGASSRLDSGGGSVESSLGEDDDEDDVGFDGRTVRKQRLETVDFSEGAAFRELARAILKFGEIYERIESSKQQQMMELEKQRLEFTKDLEFQRMNMFMDTQLEVERMKRPKYANTSS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2558 259 MobiDBLite consensus disorder prediction 113 127 - -
Sto9g2558 259 Coils Coil 206 226 - -
Sto9g2558 259 Pfam Myb/SANT-like DNA-binding domain 16 101 IPR044822 -
Sto9g2558 259 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 4 258 IPR044823 -
Sto9g2558 259 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 4 258 - -
Sto9g2558 259 Gene3D - 19 84 - -
Sto9g2558 259 MobiDBLite consensus disorder prediction 113 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2558 Sto-Chr9 28192770 28193549 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2558 15 246 Trihelix Transcription Factor Family AT1G54060 36.630 2.85e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sto9g2558 Myb_DNA-bind_4 1.5e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2558 - - jre:108980016 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2558 9 28192770 28193549 Sto9g2558 9 28192770 28193549 ECH