Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2557 ATGGGAAGCTCAGTACGAGTGAAATCAGCCGTAGTGATCAGTCCTTCTGAGCCAACCCCATCTTGTGTTCTCCCACTTTCAGCTCTCGATTCTCAACTTTTTCTTCGTTTCACTATAGAGTACCTCTTAGTCTACAAACCCTCCCCTGCCTTGGACCACCTCGCCACCTCGGCCCGTCTCAAATCCGCATTAGCCAAAGCCTTGGTTCCCTACTACCCCTTCGCCGGCAGGGTCCGGCCCAGGCCCGGCCCCGATGCTTCAGGCCTCGAGGTGCTGTGTCGAGCCCAGGGAGCCGTTTTCATCGAAGCCTTTTCTGACCGTTACACAGCCAACGACTTTATCGACAAGGCCCCCAAAACCGTCACCCACTGGAGAAAATTCTTGTCCCTCTACACGCAAGACGTTCTCAAAGGATCGCCGCCGTTGGTTGTTCAGCTCACATGGCTCAACGACGGAGCCGCCGCCGTTGGCGTCGGGATCAACCATTGTATCTGTGACGGTATCGGCAGCGCCGAGTTTCTCAACTACTTCGCTGACTTGGCTTCCGGGAAAAGCCCGGCGCCCAAGCCCGTCTGGAATCGTCACATCCTCAGCCCACGACCCATAAGGCCCAACAAGCCCAGCCCAATTATCCTCCCGGAGTTCAACCCAGTCCCCGATCTCTGCAACTTCATGACACGCGTTTCCACGGACCTCAAACCAACCTCAATTACCTTCGACAGAAGGCGTCTCCACGAGCTCCAACAGAATGCGGCTCGCTCCGCGAGTCAACTCAGCGAGTCGCACTCCCACACGTGCTTCGAGGTGCTGGCGGCGCACGTGTGGAGGAGCTGGGCGAGAGCATTGGGGTTCCCGTCGAACCAGAGGGTGAAGCTGCTGTTCAGCATCAACGTACGGAACCGGGTGAAGCCGGgcatacccgaggggtattacGGGAACGCGTTCGTGCTGGGATGCGCGGTGAGTGAGAGGAAAGGGTGTCCGGAGTCGGTGGGTGTGTTGATAGTGTCGCAATGGTCAAGGCTGGGTTTGGAAAGGGTTGACTTTGGGGCGGGAAAGCCAGTGAATGTGGGGCCAGTGTTGTGCGATAGGTACTGTTTGTTTTTGCCAGTGAATAATCAGAGGGAGGCTGTGAAGGTCATGCTGGCCGTACCTTCCTCTGCCGTTGACCACTATCAGTATTTACTCACAGCTACGCATTTATga 1206 0.5556 MGSSVRVKSAVVISPSEPTPSCVLPLSALDSQLFLRFTIEYLLVYKPSPALDHLATSARLKSALAKALVPYYPFAGRVRPRPGPDASGLEVLCRAQGAVFIEAFSDRYTANDFIDKAPKTVTHWRKFLSLYTQDVLKGSPPLVVQLTWLNDGAAAVGVGINHCICDGIGSAEFLNYFADLASGKSPAPKPVWNRHILSPRPIRPNKPSPIILPEFNPVPDLCNFMTRVSTDLKPTSITFDRRRLHELQQNAARSASQLSESHSHTCFEVLAAHVWRSWARALGFPSNQRVKLLFSINVRNRVKPGIPEGYYGNAFVLGCAVSERKGCPESVGVLIVSQWSRLGLERVDFGAGKPVNVGPVLCDRYCLFLPVNNQREAVKVMLAVPSSAVDHYQYLLTATHL 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2557 401 Gene3D - 225 327 IPR023213 -
Sto9g2557 401 Gene3D - 328 396 IPR023213 -
Sto9g2557 401 Pfam Transferase family 4 316 - -
Sto9g2557 401 Pfam Transferase family 328 389 - -
Sto9g2557 401 Gene3D - 2 211 IPR023213 -
Sto9g2557 401 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 321 395 - -
Sto9g2557 401 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 323 - -
Sto9g2557 401 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 321 395 - -
Sto9g2557 401 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2557 Sto-Chr9 28187108 28188424 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2557 5 396 Monolignol Biosynthesis Gene Families AT5G48930 24.943 5.05e-35 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2557 - - gmx:100817048 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2557 9 28187108 28188424 Sto9g2557 9 28187108 28188424 ECH