Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2543 ATGGCTGTCTCCGACGTCGGAGCTGTACTAGAATTCTTGAGGAACAATGGGTTCACAGAAGCAGAGTCTGCCCTCAAAGAGGACATTATTGAGAAGGGTGAAACGGCGACGTTTGACTACGAGAAGTTCTTCTTCCCAATGGTGCCGCCGCCTCCGCCGGTCAGAGTCCGATCGTTTTCCCGCTGTTCGGAGGCGATGGGTGCCAGAGATTGCTCCAAATCAAGCTCTAAGTCGTCGGAGGATGAGTTCGTGAGCTTGGGATCATCTACTTCCGATGTTTGCTCTTCCGaATTCATCAATCCATATGGGATCCGCTCCTCATCTCAGACTCACAATGACTCTGAATCTTCATCTGATAGATTATCTCAGTTTGGCACAGCGCGTGACTACCCCGACTTTGACATGCAAAATGAGCCATATTGGTACAATgagaaagatgatgatgatttcATGACGCCCAGTTTTGAAGGGCCAGATTTCTTTGGCTATTACAGTGAGGATAAGTTCATCATGACATCAGAAACTGAGAATCAGTGTGAAAATCCTCTGGCTAATGATTACAACTGCGAGGGATTTCAGTTAGAGGAAAATGGTGATTACATGGACAAGCCATGCCTTTTTAATCATTCAGCTGTAGGAAATGAAAAGACGACTGGTTCAAAAGACTATGATCATATTGATAAGAAAGATCAGCTTGAAGGTGGATTGGAGAGAGAGCTTGAGAATCATACTCTTGCCTATAATTGTGAAGTCCCATTTTGCAAACGCTCTGCAAATTCAGGATCAGGAGAGTCTTGTAGTGGGGATCCTACAAATGATAGCTACCCTAGTTTAAAGGAAATTCATCTAAATGATTTTCAGTTAAAGATTGTTGGGGATAGTTCCTCTACCGATTCTGCACCCGAGCATTCTAAGAACCAAATTTTTGACTACTATTCTAACAAAAACAGCAGTAAGGTGCACAAAGCTTCCTATGACTTAACTATCGAAGTTGCAGAAACAGATCTACCAAATGGACTTGACAGCTATAAAGCTCGAGATTGTGCTGAATTAACTGAAGAATGCCAAGAACCAGAGATGGCTGCAGATGAAGAGGATATCACTGACGATGAGCTCTTAAAGTACACTCACGAGGATGAATATGAAGTATTTGACCTACGAATAATACATAGAAAGAACAGAACTGGATTTGAAGAAAGCAAGGATCTGCCTATTGTGCTAAATACGGTGATAGCTGGCAGGTACTATGTAACAGAATATCTTGGTTCGGCTGCCTTCAGTAAGGTTGTTCAGGCACATGATCTTCAAACGGGAATAGATGTTTGCTTgaagattataaaaaatgacaaaGACTTTTTTGACCAAAGCTTAGATGAAATCAAACTTCTAAAGCTTGTCAATAAGCACGATCCTGCTGATGGATGCCACATATTGCGTCTTTATGACTACTTCTATCATCAGGAGCATCTATTCATTGTTACTGAGCTTCTGCGAGCAAACTTATACGAATTTCAGAAATACAATCAAGAATCTGGTGGTGAAGCATATTTTACGTTGAGCAGGTTGCAGCTGATTACTCGTCAGTGTTTGGAGGCACTGCAATACTTGCATAGCATGGGAATCATTCACTGTGACCTGAAGCCAGAAAATATTCTTATCAAAAGTTACAAAAGATGTGAGATAAAGGTTATTGATCTGGGAAGCAGTTGCTTTCTATCTGACAATTTGTGCCTATATGTACAATCGCGATCCTATAGGGCTCCTGAAGTGATGTTAGGCCTTCAATACGATGAGAAGATTGACATATGGTCTCTTGGCTGTATCTTGGCTGAGCTATGCTCTGGTGAAGTGCTCTTTCCAAATGATGCTGTTGCGATAATTCTTGCGCGCATGATTGGAATGCTTGGTCCTATTGATCTGGAGATGCTAGTGAAAGGGCAGGAAACACACAAGTACTTCACcaaagaatatgatatatattatgtaaatgAGGAGACAAACCAATTGGAGTACATAATTCCAGAAGAGTGGTCATTGGAGCAACACTTGCAGACTTCTGATACAATGTTTATGGACTTTGTCAGATATTTGCTTAACACCAATCCCAGAAGACGACCAACTGCAAGACAGGCATTAAAGCATCCATGGCTTTCCTATGTTTATAGCTCCAAGTAG 2175 0.4078 MAVSDVGAVLEFLRNNGFTEAESALKEDIIEKGETATFDYEKFFFPMVPPPPPVRVRSFSRCSEAMGARDCSKSSSKSSEDEFVSLGSSTSDVCSSEFINPYGIRSSSQTHNDSESSSDRLSQFGTARDYPDFDMQNEPYWYNEKDDDDFMTPSFEGPDFFGYYSEDKFIMTSETENQCENPLANDYNCEGFQLEENGDYMDKPCLFNHSAVGNEKTTGSKDYDHIDKKDQLEGGLERELENHTLAYNCEVPFCKRSANSGSGESCSGDPTNDSYPSLKEIHLNDFQLKIVGDSSSTDSAPEHSKNQIFDYYSNKNSSKVHKASYDLTIEVAETDLPNGLDSYKARDCAELTEECQEPEMAADEEDITDDELLKYTHEDEYEVFDLRIIHRKNRTGFEESKDLPIVLNTVIAGRYYVTEYLGSAAFSKVVQAHDLQTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPADGCHILRLYDYFYHQEHLFIVTELLRANLYEFQKYNQESGGEAYFTLSRLQLITRQCLEALQYLHSMGIIHCDLKPENILIKSYKRCEIKVIDLGSSCFLSDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVAIILARMIGMLGPIDLEMLVKGQETHKYFTKEYDIYYVNEETNQLEYIIPEEWSLEQHLQTSDTMFMDFVRYLLNTNPRRRPTARQALKHPWLSYVYSSK 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2543 724 Gene3D Transferase(Phosphotransferase) domain 1 469 717 - -
Sto9g2543 724 MobiDBLite consensus disorder prediction 105 130 - -
Sto9g2543 724 SMART serkin_6 415 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2543 724 ProSiteProfiles Protein kinase domain profile. 415 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2543 724 ProSitePatterns Serine/Threonine protein kinases active-site signature. 541 553 IPR008271 GO:0004672|GO:0006468
Sto9g2543 724 CDD PKc_DYRK_like 415 717 - -
Sto9g2543 724 PANTHER DUAL SPECIFICITY PROTEIN KINASE 4 721 - -
Sto9g2543 724 Pfam Protein kinase domain 417 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2543 724 PANTHER HYPOTHETICAL SER-THR PROTEIN KINASE-RELATED 4 721 - -
Sto9g2543 724 MobiDBLite consensus disorder prediction 105 124 - -
Sto9g2543 724 Gene3D Phosphorylase Kinase; domain 1 410 496 - -
Sto9g2543 724 SUPERFAMILY Protein kinase-like (PK-like) 404 720 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2543 Sto-Chr9 28027553 28030927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2543 412 712 MAP Kinase Gene Family AT5G19010 30.530 4.55e-32 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Sto9g2543 Pkinase 2.3e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2543 - - gmx:100783988 1091.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2543 9 28027553 28030927 Sto9g2543 9 28027553 28030927 ECH