Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2514 ATGAAGAGGGATCACCAAAGTACCTGCGCTGGTTCTAGCTATGGAGTCGGAGGAGGAAGAAATGGGAATACTGCTGCCGCTGCTGTGAAAGCAGAATGCTCATCAATGTCAAGTGGAAAAGCGAAGATGTGGGAGGAAGAGCACGAAACGGGTGGGATGGATGAGCTGCTTGCGGCTTTGGGTTACAAGGTGCGGGCGTCGGACATGGCGGATGTGGCGCAAAAGCTTGAGCAGTTAGAGATGGTGATGGGCACTGCTCAGGAAGATGGAATTTCCCATCTCGCTAGCGACACCGTCCACTACGACCCTACTGATCTCTACGGATGGGTTCAGAGCATGCTCACTGAGCTCAACAATTCCCCCAATCCTCTCGATCCATCGGGGCTCTTGGGAACCCAGCAAATCGACGATCCTATTCTTGCTCCGGCGGAGTCCTCCACCATAACTAGCATCGATTTCTCCAATTCCCGACATCAGATTGGGCATCAATCGCGGGTTTACAACGATGATTCAGAGTATGACCTTCGCGCAATCCCTGGTATGGCAGCGTACCCGCCGCAGAACGAACAGAACCAAGAGAGGGAAAACATGAACAAACGATTGAGAAGTTCACCAGTTGTATCAGATTCCATGCCGGTGCTACCTTCGCCGCCGCCGGCGACTGTGTCGGAGCCCACACGGCCAGTGGTTCTCGTTGACTCTCAAGAAACAGGTGTTCGTCTGGTGCACACACTCATGGCTTGTGCAGAGGCAATTCAGCAGAACAATCTGAAGGTGGCAGAGGCTCTCGTGAAGCACGTGAGCTTGCTCACGGCGTCTCAAGCCGGAGCAATGAGAAAGGTAGCCTCCTACTTCGCCCAAGCTCTGGCTCGTCGAATTTACGGAATCTACCCTCAAGAAGACCTGGATTCCTCCTTCTCCGATATGCTCCATATGCATTTCTACGAGTCCTGCCCTTACCTCAAATTCGCCCATTTCACTGCGAACCAGGCCATTCTCGAAGCATTCGCCAACGCCAACAGAGTCCACGTCATCGATTTCGGCCTCAAGCAAGGTATGCAATGGCCCGCTCTAATGCAAGCCCTCGCGTTAAGGCCCGGCGGCCCACCGACCTTCCGCCTCACCGGAATCGGCCCGCCGCAACCGGACAACACCGACGCTCTGCAACAAGTGGGATGGAAGTTAGCGCAATTGGCTGAAACCATTGGAGTCCAATTCGAATTCCGCGGATTCGTGTGCAACAGTCTGGCGGATCTTGACCCGTCACTGCTCGAGATCCGACCCGGAGAAGCCGTCGCCGTGAACTCAGTCTTCGAGCTCCACCGTATGCTGGCTAGACCCGGCGCCATCGACAAGGTGCTCAACACCGTCAAGGCTTTCAACCCCAAGATCGTGACCATAGTTGAACAGGAAGCGAACCACAACGGGCCGGTTTTCTTGGACCGGTTCACGGAGGCTCTGCATTACTACTCCAACCTGTTTGACTCGCTGGAGGGTTCGTCGTCCGGTTTGGCGCCACCGAGTCGGGACCTGGTGATGTCGGAGCTGTACCTAGGGAGACAGATATGCAACGTGGTGGCGTGCGAAGGGGTGAACCGGGTGGAGAGGCACGAAACGCTGAACCAGTGGAGGGGAAGGATGGGATCCGCGGGGTTCGAGCCGGTTCATCTGGGGTCGAACGCGTTCAAGCAAGCGAGTATGTTATTGGCTCTGTTCGCCGGCGGCGACGGGTATAGGGTGGAAGAGAACAACGGATGCCTTATGCTTGGGTGGCACACGCGCCCACTAATCGCCACCTCGGCGTGGAAAATTCCCGCCGTCGATGGCAGTGAGTTGACTCACACAAAATTCCTTGCCCCATACGATCCTATGGCTTCCATTGGACTCAGAGCTGTCAAGCATGTTCCACCAAGAGAACAACCAGTTAGCTTATAA 1935 0.553 MKRDHQSTCAGSSYGVGGGRNGNTAAAAVKAECSSMSSGKAKMWEEEHETGGMDELLAALGYKVRASDMADVAQKLEQLEMVMGTAQEDGISHLASDTVHYDPTDLYGWVQSMLTELNNSPNPLDPSGLLGTQQIDDPILAPAESSTITSIDFSNSRHQIGHQSRVYNDDSEYDLRAIPGMAAYPPQNEQNQERENMNKRLRSSPVVSDSMPVLPSPPPATVSEPTRPVVLVDSQETGVRLVHTLMACAEAIQQNNLKVAEALVKHVSLLTASQAGAMRKVASYFAQALARRIYGIYPQEDLDSSFSDMLHMHFYESCPYLKFAHFTANQAILEAFANANRVHVIDFGLKQGMQWPALMQALALRPGGPPTFRLTGIGPPQPDNTDALQQVGWKLAQLAETIGVQFEFRGFVCNSLADLDPSLLEIRPGEAVAVNSVFELHRMLARPGAIDKVLNTVKAFNPKIVTIVEQEANHNGPVFLDRFTEALHYYSNLFDSLEGSSSGLAPPSRDLVMSELYLGRQICNVVACEGVNRVERHETLNQWRGRMGSAGFEPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWKIPAVDGSELTHTKFLAPYDPMASIGLRAVKHVPPREQPVSL 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2514 644 Coils Coil 69 89 - -
Sto9g2514 644 ProSiteProfiles GRAS family profile. 232 603 IPR005202 -
Sto9g2514 644 Pfam Transcriptional regulator DELLA protein N terminal 54 121 IPR021914 -
Sto9g2514 644 Pfam GRAS domain family 241 603 IPR005202 -
Sto9g2514 644 Gene3D - 52 117 IPR038088 -
Sto9g2514 644 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 49 603 IPR005202 -
Sto9g2514 644 MobiDBLite consensus disorder prediction 182 225 - -
Sto9g2514 644 SMART DELLA_2 54 127 - -
Sto9g2514 644 PANTHER DELLA PROTEIN RGL1 49 603 IPR030006 GO:0003712|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2514 Sto-Chr9 27860619 27869296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2514 40 604 GRAS Transcription Factor Family AT2G01570 61.695 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto9g2514 GRAS 2.5e-139 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2514 K14494 - gmx:547719 880.937