Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2510 ATGGGCCTCTCCCGAGGAACAACCTGCACTGACGATTCTGACTCTCGCGACCCTCCCAATGCACCAAACGCTCCATACGCTTCTTCCTCTGTAGTCACAGATCACCACTGTGACTACACCAAGCACAAGTTCAGAACCATTCTCAGGAAAATGATCTGGGAGCTCGGGTTCGCCTGCGGGGCGCCGCATCGTCGCCGGCGATGCTCCGGAAAAGGCAAAGGCAACGGCCAAGGCAGGAGCGACGACGGAGGGAATGGTCATAAGAAGGCGAATCTAGAGCACAACAAGGCGTGGCTTCTGGCGGAGGCTGGAGCAGAATTGACGAATGCAGACCCACAATCTGTTCACTCATCTTTCCGTTTCAGTTTCTGTTCTCAGGTTGAGCTCGAATCCTTGAGCATGAATTCTTCCACTGCTGCGACTGTTTTGATGGTCAATCTGGACAATGGGGTGAGCGATTCTCGAGCTCGAGAGCTGAAATGGCGGAGGATAGAGTCGTTGGAGAGAAGCATTTCCCCTGTGGCTGACACTTTGATTAGGTTCAACTATGGTGAAATTGCATCTGCTACTCGCAATTTTTCCAAAGGCAGAGTATTGGGGAGAGGAGCCTTGAGCTGTGTATTTAGAGGAAGAGTAGGAATTTTGAGGAGTGCTGTAGCAATCAAACGGTTGGACAAGGAAGATAAGGAATCTGCAAAGGCGTTTTGCAGAGAATTGATGATTGCTAGTTCTCTTCATCACCAAAACATTGTTCCTCTTGTGGGGTTTTGTATTGACCCAGAAGAGGGTTTATTTCTGGTATACAAGTATGTGTCTGGAGGCAGCTTAGAGCATCACTTGCATGAGAGGAAGAAGGGCTTGAAGGGTAGTTCATCACTTCCATGGTCTGTGAGGTATAAAGTTGCAATTGGGATTGCAGAAGCTGTGGCTTATCTTCACAATGGAACTGAAAGATGCGTTGTTCATAGAGACATTAAGCCCTCAAACATTCTTCTTTCCTCTAGGAAGACTCCCAAGTTGTGTGATTTTGGTTTAGCTACATGGACTTCTGCTCCTTCAGTTCCTTTCCTTTGCAAAACTGTTAAAGGAACATTTGGTTATTTGGCTCCTGAGTATTTCCAACATGGGAAAGTATCCGATAAGACCGACGTATATGCTTTTGGAGTGGTTTTATTGGAACTCATAACTGGCCGGAAGCCAATTGAAGTGAAAAATCCAGCAGGAGAGGAGAACTTGGTCTTATGGGCTAAACCATTGCTACAGAAAGGAAAAGGAGCCATTGAAGAGTTGCTAGATCCTCAACTCAAGTGCAGTTTGAGATACTCAAATCAGATGGCTCGGATGATTGAAGCAGCAGCTGCGTGTGTTACGAATGAAGAATCTCGGAGACCAGGAATACATGAGATCATTGCAATAATGAAAGGCGAAGAAGAACCCGTTCTATCGAAACGAAAGAAGGCGAGTCTTCTTGTGAATGGACTGGTCATTGATTGCTACTCTCAATCTCAGTTACAACAACAAACACACAATGAGATGAAAAGTCACTTGGCTTTGGCAATGCTAGGAGTTTCAGAGTTTGAAGACGATGATTATCTCTATGGTCGTTAA 1608 0.4602 MGLSRGTTCTDDSDSRDPPNAPNAPYASSSVVTDHHCDYTKHKFRTILRKMIWELGFACGAPHRRRRCSGKGKGNGQGRSDDGGNGHKKANLEHNKAWLLAEAGAELTNADPQSVHSSFRFSFCSQVELESLSMNSSTAATVLMVNLDNGVSDSRARELKWRRIESLERSISPVADTLIRFNYGEIASATRNFSKGRVLGRGALSCVFRGRVGILRSAVAIKRLDKEDKESAKAFCRELMIASSLHHQNIVPLVGFCIDPEEGLFLVYKYVSGGSLEHHLHERKKGLKGSSSLPWSVRYKVAIGIAEAVAYLHNGTERCVVHRDIKPSNILLSSRKTPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIEVKNPAGEENLVLWAKPLLQKGKGAIEELLDPQLKCSLRYSNQMARMIEAAAACVTNEESRRPGIHEIIAIMKGEEEPVLSKRKKASLLVNGLVIDCYSQSQLQQQTHNEMKSHLALAMLGVSEFEDDDYLYGR 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2510 535 ProSiteProfiles Protein kinase domain profile. 193 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2510 535 SMART serkin_6 193 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2510 535 PANTHER OS01G0750732 PROTEIN 13 533 - -
Sto9g2510 535 Pfam Protein kinase domain 194 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2510 535 Gene3D Phosphorylase Kinase; domain 1 165 270 - -
Sto9g2510 535 MobiDBLite consensus disorder prediction 63 89 - -
Sto9g2510 535 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1 13 533 - -
Sto9g2510 535 Gene3D Transferase(Phosphotransferase) domain 1 271 491 - -
Sto9g2510 535 SUPERFAMILY Protein kinase-like (PK-like) 174 471 IPR011009 -
Sto9g2510 535 ProSitePatterns Serine/Threonine protein kinases active-site signature. 320 332 IPR008271 GO:0004672|GO:0006468
Sto9g2510 535 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2510 Sto-Chr9 27838517 27841060 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2510 181 476 Trihelix Transcription Factor Family AT1G70460 43.289 4.61e-71 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Sto9g2510 Pkinase 5.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2510 - - zju:107416245 843.958