Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2498 ATGGGTTGCTGCTTTAGTGCCAAGATCAAAGCTGAGAGCCCTCCACGCAATGCTTTGCAAGAGGATGGTGGGATGGGATACGAATTTATGGatttgaaatcaggTTATGGTAGCCCAAAAGAAGATGGTTTAAGTAGCAAGATCTCTACACCATCTGTACCTCCAACTCCTAGGTCAGAGGATGAGATATTGCAATCCTCCAATATCAAGAGCTTCAGCTTCAATGAGCTTAGAGTTGCTACTAGGAACTTTCGTCCGGATAGTGTGGTGGGCGAAGGTGGGTTTGGTTGTGTATTTAAGGGGTGGATTGATGAGCAGATGCTAACCCCGGTTAAACCGGGGACAGGACTTGTCATTGCTGTGAAAAGGCTTAACCAAGAGGGCCTTCAGGGACACAGTGAATGGTTGACAGAAATAAACTACCTGGGGCAGCTGCATCATCCTAATCTAGTGAAACTGATTGGTTACTGCTTAGAGGATGACCACCGGATGCTGGTATATGAATTTTTGGCTAAGGGAAGTTTGGATAATCATTTGTTCAGGAGGGCTTCTTACATTCAACCACTTTCTTGGAGAATCCGTATGAAGGTTACTCTTGATGCTGCGAAGGGTCTTGCGTTTCTTCACAGTGACAAAGCAAAAGTTATATATCGAGACTTCAAAACTTCTAATATCTTGCTCGATTCGAACTATAATGCAAAACTCTCTGATTTTGGGTTGGCAAAGGATGGACCAGCAGGTGATCAGAGCCATGTCTCTACAAGAGTAATGGGCACATATGGCTATGCTGCTCCTGAGTATATGGCCACAGGTCACTTAACCAAAAGGAGTGATGTATACAGCTTTGGAGTAGTTCTCCTGGAAATCATATCAGGCAAACGTGCATTGGACAACAACAGGCCATCCGGAGAGCACAATTTGGTCGACTGGGCGAAGCCGTACCTCAGTAGCAAACGGCGAATCTTCCAAGTTATGGATGCTCGTATTGAAGGCCAGTACACCCACCATGAAGCAATGAAAGTGGCTAACCTTGCACTTCAATGCCTGGCTGCAGAACCTAAGCTTAGACCAAACATGGAGGAGGTGGTTAGAGCATTGGAACAACTTCAGGATTCTAGTGACAGAGGTACAGAAGAGGGAAGCTCACAAGATAAGAATGTCAGAAGTAGTCATAGCTCAAGCAGCAATGGTCCTAACAAGCAACGTAGAAAAAGTTCCACTGAATCTTTAAATGGAGAAGGCACTTCTAATACGAGACCTTCTGCTTCTCCTCTTCGTACATAG 1284 0.447 MGCCFSAKIKAESPPRNALQEDGGMGYEFMDLKSGYGSPKEDGLSSKISTPSVPPTPRSEDEILQSSNIKSFSFNELRVATRNFRPDSVVGEGGFGCVFKGWIDEQMLTPVKPGTGLVIAVKRLNQEGLQGHSEWLTEINYLGQLHHPNLVKLIGYCLEDDHRMLVYEFLAKGSLDNHLFRRASYIQPLSWRIRMKVTLDAAKGLAFLHSDKAKVIYRDFKTSNILLDSNYNAKLSDFGLAKDGPAGDQSHVSTRVMGTYGYAAPEYMATGHLTKRSDVYSFGVVLLEIISGKRALDNNRPSGEHNLVDWAKPYLSSKRRIFQVMDARIEGQYTHHEAMKVANLALQCLAAEPKLRPNMEEVVRALEQLQDSSDRGTEEGSSQDKNVRSSHSSSSNGPNKQRRKSSTESLNGEGTSNTRPSASPLRT 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2498 427 MobiDBLite consensus disorder prediction 43 61 - -
Sto9g2498 427 MobiDBLite consensus disorder prediction 369 385 - -
Sto9g2498 427 MobiDBLite consensus disorder prediction 30 61 - -
Sto9g2498 427 Pfam Protein tyrosine and serine/threonine kinase 88 366 IPR001245 GO:0004672|GO:0006468
Sto9g2498 427 CDD STKc_IRAK 90 369 - -
Sto9g2498 427 MobiDBLite consensus disorder prediction 386 427 - -
Sto9g2498 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Sto9g2498 427 ProSitePatterns Protein kinases ATP-binding region signature. 90 122 IPR017441 GO:0005524
Sto9g2498 427 PANTHER OS01G0588500 PROTEIN-RELATED 34 408 - -
Sto9g2498 427 Gene3D Phosphorylase Kinase; domain 1 59 169 - -
Sto9g2498 427 SUPERFAMILY Protein kinase-like (PK-like) 59 368 IPR011009 -
Sto9g2498 427 MobiDBLite consensus disorder prediction 369 427 - -
Sto9g2498 427 ProSiteProfiles Protein kinase domain profile. 84 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2498 427 PANTHER KINASE 1B 34 408 - -
Sto9g2498 427 Gene3D Transferase(Phosphotransferase) domain 1 170 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2498 Sto-Chr9 27741466 27743985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2498 60 374 Glycoside Hydrolase AT3G07070 48.896 1.29e-104 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sto9g2498 PK_Tyr_Ser-Thr 3.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2498 - - gmx:100775335 652.514