Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2467 ATGGCCAAATCCCTCGTGCTTCTCTGCCTTTTCTCTCTGATTCTCACCTTCAACTTCAACCTTGTAAAATCTCAGCACGACGAGCTCTACTTCGAAGGATTCTACGCCTCTGGCAGCAACATAAGCTTAAACGGGGGTGCACAGATTGGggaaaatggcatactccgaTTAACAAACGACACGCTTAGAGTACTCGGCCATGCCTTTTACACATCGCCAATCCACTTCAAGAAGGGAAACGACGGTAAAGTTTCCTCCTTTTCCACCTCTTTCGCTTTTGCGATCATTCCAGAGTACCCAAAATTGGGTGGTCATGGTTTTGCTTTCACCATTTCTCCCACCAAAGAGCTTGTTGGTGCGTATCCTAGTCAGTACTTAGGCCTTCTCAATGCAAACGATATTGGCAATTTTTCCAACTATTTGTTCGCCGTGGAGTTCGACACTGTCCAGGATTTCGAGTTCGGAGACATCAATGATAACCATGTGGGTATCGACCTGAATAGCATGATATCAAACAAGTCCGTTCCAGCTAACATCAATCTGAAGAGTGGAAAGGTTATTCTATCATGGGTTGATTACGATTCCTCCAagaatcaagtggaagttcgactTTCTACATCCCCTGAAAAACCCAGTTCCCCAATTTTATCCTATGAAGTGGATCTCGGAAGAATTCTAGAAGAGTCCATGTATGTGGGGTTTTCTTCTTCAACTGGGTTGCTTGCAAGCTGGCATTACATCTTGGGTTGGAGCTTCAAGATGAATGGAGAGGCAAAGTCTCTAGATTTGGAAAAATTGCCTACACTTCCCGAGTATAAAAAGAATCAAAAGGGGTTAATCGTGGGAGTATCTATTACAGCTATATTTGTCATAACTGGAGCAGCCGTTATAGCAATTTATCTAATTAGAAAGATTAAGTATTCGGATGTAATAGAAGCTTGGGAGCTTGATGTTGGTCCCCACAGATTCCCATACGAGGAGCTAAAGCAAGCGACAAAAGGATTCAAAGACAAAAACCTCATCGGGTTCGGTGGGTTTGGTCGAGTTTACAAAGGTATTCTCCCAAATTCCAATACCCAAATCGCCGTGAAGCGAATCTCCCATGAATCAAAACAAGGGTTACGAGAATTTGTGTCTGAGATAGCCACCATTGGTCGGCTTCGTCATAGGAACCTCGTTCAACTACTAGGTTGGTGTCGAAGGCGTGGTGACCTGTTACTTGTATACGATTTCATGGTCTATGGGAGCCTAGACAAGTACCTATTTGATGAACCAAAAGCAATATTGAGGTGGGAACAGAGGTTTAAAATCATAAAAGGCGTAGCTTGGGGTCTTCTATATTTGCACGAGGAATGGGAGCAAGCTGTGATTCACAGAGACATCAAAGCAGGGAATGTTCTATTGGATTCGGAAATGAATGCCAGGCTTGGCGATTTCGGGTTGGCCAAGTTGTATGAACACGGGTCGAATCCGAGTACGACCCGGGTGGTGGGGACTTTGGGTTATCTGGCACCGGAGCTCACGCGCACGGGGAAGCCCACGACAAGCTCCGACATTTTTGCGTTGGGTGCTCTGTTGCTAGAAGTGGTGTGCGGGAGAAGGCCCATTGAGCCCAAGGCGTTGCCGGAGGAGCTGATATTGGTGGACTGGGTGTGGGATCAGTGGCGGGTCGGGGCGATACTGGACGTGGTTGACCCGAAATTGGGAGGTGAATTTGATGAGATGCAGGCTGTGTTGGTGCTCAAACTGGGATTGATGTGTTCGAATAACTCACCCCAAGCACGACCCAGTGTGAGGCAGGTGGTTAGGTACTTGGAGGGGGAGGCGCCGCTGCCGGAGGTGGTGCCGGGGCCGGATGCGTTTGATGTTAAAAAGGAGGGTGGAGGAGGAGATGGCGGCGGCGGTGATGGTATTGGGACTGGTGAATTTGAGGATTTTGTGCATTCGTATCCAGTGTCGTCGTCTTTTGACAAGACGAGTGCGTGGTTGTTGGCCGGCGACGGCAGGGAGGACGATGTCGAGGCTGCCTCTGGTTCGCCTCTCTCGCTCTCCGGTAGACGGGAGGTTTTATCTGTTCCCAAGCAAATTAAATTGGAAACCAGAAATGTAGATAATGATTTCTCAGGCAATAATTTTGAAGACGTCGACTCTCCCTTTTGA 2160 0.4681 MAKSLVLLCLFSLILTFNFNLVKSQHDELYFEGFYASGSNISLNGGAQIGENGILRLTNDTLRVLGHAFYTSPIHFKKGNDGKVSSFSTSFAFAIIPEYPKLGGHGFAFTISPTKELVGAYPSQYLGLLNANDIGNFSNYLFAVEFDTVQDFEFGDINDNHVGIDLNSMISNKSVPANINLKSGKVILSWVDYDSSKNQVEVRLSTSPEKPSSPILSYEVDLGRILEESMYVGFSSSTGLLASWHYILGWSFKMNGEAKSLDLEKLPTLPEYKKNQKGLIVGVSITAIFVITGAAVIAIYLIRKIKYSDVIEAWELDVGPHRFPYEELKQATKGFKDKNLIGFGGFGRVYKGILPNSNTQIAVKRISHESKQGLREFVSEIATIGRLRHRNLVQLLGWCRRRGDLLLVYDFMVYGSLDKYLFDEPKAILRWEQRFKIIKGVAWGLLYLHEEWEQAVIHRDIKAGNVLLDSEMNARLGDFGLAKLYEHGSNPSTTRVVGTLGYLAPELTRTGKPTTSSDIFALGALLLEVVCGRRPIEPKALPEELILVDWVWDQWRVGAILDVVDPKLGGEFDEMQAVLVLKLGLMCSNNSPQARPSVRQVVRYLEGEAPLPEVVPGPDAFDVKKEGGGGDGGGGDGIGTGEFEDFVHSYPVSSSFDKTSAWLLAGDGREDDVEAASGSPLSLSGRREVLSVPKQIKLETRNVDNDFSGNNFEDVDSPF 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2467 719 SMART serkin_6 335 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2467 719 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 11 681 - -
Sto9g2467 719 CDD lectin_legume_LecRK_Arcelin_ConA 31 256 IPR001220 GO:0030246
Sto9g2467 719 Pfam Legume lectin domain 30 266 IPR001220 GO:0030246
Sto9g2467 719 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 273 IPR013320 -
Sto9g2467 719 PANTHER - 11 681 - -
Sto9g2467 719 SUPERFAMILY Protein kinase-like (PK-like) 316 613 IPR011009 -
Sto9g2467 719 Gene3D Transferase(Phosphotransferase) domain 1 412 616 - -
Sto9g2467 719 Pfam Protein kinase domain 335 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2467 719 Gene3D Phosphorylase Kinase; domain 1 320 411 - -
Sto9g2467 719 CDD STKc_IRAK 341 607 - -
Sto9g2467 719 Gene3D - 28 255 - -
Sto9g2467 719 ProSitePatterns Protein kinases ATP-binding region signature. 341 364 IPR017441 GO:0005524
Sto9g2467 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Sto9g2467 719 ProSiteProfiles Protein kinase domain profile. 335 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2467 Sto-Chr9 27553147 27555556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2467 22 671 Receptor kinase-like Gene Family AT3G55550 59.791 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sto9g2467 Pkinase 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2467 - - rcu:8274857 956.436