Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2465 ATGACAGGGTGTGGCTCTTCATGTGGAGCATGCAAGTTCCTGAGGAGAAAGTGCACAGTTGACTGTGTATTTGCTCCTTACTTCTCCTATGACCAGGCTGCAACCCATTTTGCAGCAGTTCACAAGGTTTTCGGGGCTAGCAATGTTTCGAGGCTATTGTCACACCTACCAATTCAAAACAGAAGTGATGCTGCCATCACCATATCCTACGAAGCACTGGCTCGGGTTCATGATCCTATATATGGTTGTGTAGCTCATATATTTGCCCTGCAGCAACAGATTGCTAGCTTGCAGGAGGAGATAGATATTCTTAGTGTAATGGCGAATTCTAGTGTTGGAGCTGCTGGCTGTGGAAGTTTTCTAGCACCAACAAACTCAAACAACGGGATAGAGCTTCCTAATTTGCAGAATGATGACACaaggattcaaaattatcatgaTCAAGCATTTGGATTGGAAAACCAGTTATTTGGTGAGTCCAACCTTAATACATTAGAGAAGCTCCTCTatggaattgatcaagaggtgtCCTTTTTGAATCATCCATGGTTCAATCAAGCATAG 564 0.4078 MTGCGSSCGACKFLRRKCTVDCVFAPYFSYDQAATHFAAVHKVFGASNVSRLLSHLPIQNRSDAAITISYEALARVHDPIYGCVAHIFALQQQIASLQEEIDILSVMANSSVGAAGCGSFLAPTNSNNGIELPNLQNDDTRIQNYHDQAFGLENQLFGESNLNTLEKLLYGIDQEVSFLNHPWFNQA 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2465 187 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 166 - -
Sto9g2465 187 PANTHER LOB DOMAIN-CONTAINING PROTEIN 33 1 166 - -
Sto9g2465 187 Coils Coil 87 107 - -
Sto9g2465 187 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Sto9g2465 187 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2465 Sto-Chr9 27538225 27539267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2465 1 111 AS2 family AT5G06080 72.321 1.81e-54 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto9g2465 LOB 8.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2465 K13945 - gmx:100787638 252.677