Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2464 ATGGCGAATCGGTGGTGGGCTGGAAATGTGGCATTGAGACCCACCGACCCCATGTCATCTCCCTCACTTCAGCTCAGAAACCCAGAAGACGTCGACCATGGTGGATTGAATCGTCTAGGGCCTAGACGAGAACAAGAATTTATGGACAACCCCAACACCAACTCCACCCCAACCAATAGCAGCAACAGCAACACAAACCCAAACGCCCCAACCACCGAAGCAGACGACGACAGCCGCGAAGGCGACGACCAAAACCCCGGCAGCCACGAAACGGTGGAGCCCGGCAGCAGCGGCCGCCGCCCACGTGGCCGCCCACCGGGGTCCAAGAACAGGCCGAAACCTCCCATCGTCATAACAAAGGAAACCCCCAACGCCCTCCGAAGCCACGTCTTGGAAATCGCCAGCGGGAGCGACGTCGCCGAAAGCATAGCCACCTTCGCGAATCGCCGGCACCGAGGGGTGTCCGTGCTCAGCGGAAGCGGCATTGTGACCAATGTCACACTCCGACAACCTGCGGCGCCTGGTGGGGTAATCACTCTCAATGGACGGTTCGAGATATTGTCTCTCTCCGGCGCGTTCTTGCCGGCGCCTTCACCTCCGGGAGCGACCGGGCTAACGGTGTACTTAGCCGGCGGACAAGGGCAGGTTGTGGGGGGTACGGTGGTGGGTTCGCTGGTAGCATCAGGTCCAGTGATGGTGATTGCAGCGACATTTGCTAATGCTACATACGAGAGGTTACCGTTAGAGGAAGAAGGTGGTGGTGAGGAAATGCAAGTGCAGGAAcaacagcagcagcagcagcagcaatcAGGAGTTAATTCAGGTAATAGTGGAACTCCAGCATCACAAGGTTTGGGTGAACAAGTTTCAATGCCAATGTACAATTTGCCTCCAAATCTGCTATCAAATGTATGTTTCTCTTCTCCGACGGTTAATTTCTTTGTAAGAATAACAAGCAAGGAAGAGGATGGAAATATGGAATGGTCCCAAAATAATATTGGAGCTGTGCAGGGATTTTAA 1020 0.5333 MANRWWAGNVALRPTDPMSSPSLQLRNPEDVDHGGLNRLGPRREQEFMDNPNTNSTPTNSSNSNTNPNAPTTEADDDSREGDDQNPGSHETVEPGSSGRRPRGRPPGSKNRPKPPIVITKETPNALRSHVLEIASGSDVAESIATFANRRHRGVSVLSGSGIVTNVTLRQPAAPGGVITLNGRFEILSLSGAFLPAPSPPGATGLTVYLAGGQGQVVGGTVVGSLVASGPVMVIAATFANATYERLPLEEEGGGEEMQVQEQQQQQQQQSGVNSGNSGTPASQGLGEQVSMPMYNLPPNLLSNVCFSSPTVNFFVRITSKEEDGNMEWSQNNIGAVQGF 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2464 339 MobiDBLite consensus disorder prediction 257 289 - -
Sto9g2464 339 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 47 309 IPR014476 GO:0003680
Sto9g2464 339 SUPERFAMILY AF0104/ALDC/Ptd012-like 124 252 - -
Sto9g2464 339 Pfam Plants and Prokaryotes Conserved (PCC) domain 127 239 IPR005175 -
Sto9g2464 339 MobiDBLite consensus disorder prediction 47 72 - -
Sto9g2464 339 MobiDBLite consensus disorder prediction 31 45 - -
Sto9g2464 339 CDD DUF296 127 210 IPR005175 -
Sto9g2464 339 MobiDBLite consensus disorder prediction 251 289 - -
Sto9g2464 339 ProSiteProfiles PPC domain profile profile. 123 260 IPR005175 -
Sto9g2464 339 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 47 309 - -
Sto9g2464 339 MobiDBLite consensus disorder prediction 1 119 - -
Sto9g2464 339 Gene3D - 126 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2464 Sto-Chr9 27529279 27530570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2464 1 303 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 53.846 5.96e-72 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2464 - - qsu:112039774 357.451