Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2451 ATGGAAGTAATGGCTTCCTATAAGGTCCTCCTCTTCACGGCGGCGCTGCTAACGTGCTCCGGCCACGCAATGTCCCTCACGCGCTGCCCTAACTGCGGCAACACCTCCGTACCCTACCCACTCAGCACCGCACCCACCTGCGGTGACCCTTCCTACAAGATCCGCTGCACCTCCGGTTCACTCTTATTCGACACCCTCAACAATTCCTACCCAATCGACTCcatcaaccccaaatcccaacgCCTCGTGATCCGACCCGCTTCCCTCATATCCAACACCTGCGTCACAACCGATAAAATCCACCAGGGCATCCAGCTCAACGCAACCCTCCCCTTCAACATCACCAGTAGCAACACCATCATCTACCTCAACTGTACCAACACGCTTCTCGAATCCCCCTTGAATTGCTCCTCCGCCAGCTTGTGCCACACCTACATCAACGCCACCGCAGACGCCGCCCCCTGCGACGACGCGCCGCTCTGTTGTACCTTCAGGGCCGGCGGCTCCAGCAACTCCTACATGATTCGGGTCCGCGATGTGGGATGCAGCGCTTACTCCAGCTTTGTGAACTTGGACCCGGCCTTGCCGGTGAGCCGCTGGCCCGAACCGGGGCTGGAGATTGAGTGGGTGTCGCCGCCGGAACCGGTATGTGGGTCCCAGGCTGATTGCGACGGTGGGAATTCCACTTGCGGGTTCGACCCATCCGGGAATGGGATCAGGAGGTGCTTCTGTAACAATGAGCTCGTGTGGGACCCTATTGAAGGGGTGTGCACAGAAAAAATTACGTGTCAAAGTCCAGATGGTTGTGGGTCGTCGGATCGAACAGCACTCATAGCGGGTTTAACAAGTGGGATTGCAGTAGCTGCACTTATTCTAGGCATTATTGCGGTTTTACTCTATAAACGACACAAACGTATGAAGGAAGCAGAAGAACGGTTAGTGAGGGAACGCGAGGGCATCCTGAATGCAAGTGGGGGAAGCAGAGGCAGAGCAAAACTGTTCTCAGGCAAAGAACTCAAGAAAGCCACAAACGACTTCTCCAAAGACCGCCTCCTCGGCGTCGGTGGCTACGGCGAAGTCTACAAAGGCATTCTCCAAGACGGCACCGTCGTGGCCGTCAAATGCGCAAAACTCGGAAACGCCAAAGGCACCGACCAAGTTCTAAACGAGGTTCGGATATTGTGCCAAGTCAACCACCGCAATCTCGTGGGTCTGCTCGGTTGCTGCGTGGAGTTAGCGCAACCCACGATGGTGTACGAGTTCATAGAAAACGGGACTCTCCTTGATCACTTGCAGCCACATAAAAATACGCCCAAAGCAGATGCTTATGAGCATCTTAATTGGATAAATCGCCTTCGAATCGCCCACGACACAGCGCAAGGTCTGGCGTATCTTCACTTCTCGGCTGTGCCGCCTATATACCACAGAGATGTGAAGTCTAGTAACATCCTATTAGACAACAAGTTAAATGCTAAGGTTTCGGATTTCGGGTTATCCAGATTGGCGGAGACGGATTTGAGTCATATATCAACATGTGCTCAGGGGACGCTAGGGTATTTAGACCCGGAGTATTATAGGAATTACCAATTGACTGATAAGAGCGATGTGTATAGTTTTGGAGTGGTGTTGTTGGAGCTTTTGACGGCACAGAGGGCCATAGACTTTAGCAGGGATTCAGATGATGTGAATCTGGCGGTTTATGTGCAGAGGATGGTGGAGGAAGAGAAATTGATGGATGTGATTGATCCTAATTTGTTGAAAAATGGAGCTACCACTTTGGAAGTGGATACCATCGAGGCTTTGGCGTTTCTGGCTTTGGGATGCTTGGAGGAACGGAGGCAGAATCGACCTTCAATGAAAGAGGTAGCAGAGGAGATTGAGTATATCATTACTATCGCTACATCTAAAGATGCACAAAACTAA 1923 0.5148 MEVMASYKVLLFTAALLTCSGHAMSLTRCPNCGNTSVPYPLSTAPTCGDPSYKIRCTSGSLLFDTLNNSYPIDSINPKSQRLVIRPASLISNTCVTTDKIHQGIQLNATLPFNITSSNTIIYLNCTNTLLESPLNCSSASLCHTYINATADAAPCDDAPLCCTFRAGGSSNSYMIRVRDVGCSAYSSFVNLDPALPVSRWPEPGLEIEWVSPPEPVCGSQADCDGGNSTCGFDPSGNGIRRCFCNNELVWDPIEGVCTEKITCQSPDGCGSSDRTALIAGLTSGIAVAALILGIIAVLLYKRHKRMKEAEERLVREREGILNASGGSRGRAKLFSGKELKKATNDFSKDRLLGVGGYGEVYKGILQDGTVVAVKCAKLGNAKGTDQVLNEVRILCQVNHRNLVGLLGCCVELAQPTMVYEFIENGTLLDHLQPHKNTPKADAYEHLNWINRLRIAHDTAQGLAYLHFSAVPPIYHRDVKSSNILLDNKLNAKVSDFGLSRLAETDLSHISTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTAQRAIDFSRDSDDVNLAVYVQRMVEEEKLMDVIDPNLLKNGATTLEVDTIEALAFLALGCLEERRQNRPSMKEVAEEIEYIITIATSKDAQN 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2451 640 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Sto9g2451 640 Pfam Protein tyrosine and serine/threonine kinase 349 625 IPR001245 GO:0004672|GO:0006468
Sto9g2451 640 Gene3D Phosphorylase Kinase; domain 1 322 421 - -
Sto9g2451 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Sto9g2451 640 SUPERFAMILY Protein kinase-like (PK-like) 331 626 IPR011009 -
Sto9g2451 640 ProSiteProfiles Protein kinase domain profile. 346 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2451 640 Gene3D Transferase(Phosphotransferase) domain 1 422 639 - -
Sto9g2451 640 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 635 IPR045274 GO:0007166
Sto9g2451 640 CDD STKc_IRAK 352 627 - -
Sto9g2451 640 SMART serkin_6 346 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2451 640 PANTHER OS05G0318100 PROTEIN 17 635 - -
Sto9g2451 640 Pfam Wall-associated receptor kinase galacturonan-binding 29 84 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2451 Sto-Chr9 27425894 27428016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2451 1 636 Receptor kinase-like Gene Family AT5G02070 51.205 0.0 662
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Sto9g2451 PK_Tyr_Ser-Thr 6.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2451 - - gmx:100305415 961.059