Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2450 ATGAAGGCACTGATTTTGGTTGGTGGATTTGGAACAAGGTTGAGGCCATTGACACTCAGTGTCCCTAAGCCTCTTGTTGATTTTGCTAACAAACCCATGATCCTACACCAGATAGAGGCTCTTAAGGCTACTGGAGTTAGTGAAGTGGTATTAGCTATCAATTACCAACCAGAGGTGATGTTGAATTTTTTGAAGGAATTTGAGGCAAAGCTTGGCATCAAGATCACATGTTCTCAAGAAACTGAGCCACTGGGGACTGCAGGTCCCCTGGCTCTTGCTAGGGACAAGCTGATGGATGACTCTGGAGAGCCATTTTTTGTACTCAACAGCGACGTTATCAGTGAGTACCCGCTCAAAGAAATGATTGCATTCCATAAGGCTCATGGAGGAGAGGCTTCCATAATGGTGACAAAgGTTGATGAGCCGTCAAAATATGGTGTGGTTGTTATGGAGGAGACCACAGGGCAGGTTGAGAAATTTGTAGAAAAACCGAAGTTATTTGTTGGTAACAAAATCAATGCTGGAATCTACCTTTTGAACCCCTCAGTTTTGGACCGAATTCATCTGAGGCCTACTTCTATTGAGAAAGAAGTGTTTCCAAAGATTGCAGGAGAGAAAAAGCTATATGCAATGGTTCTGCCAGGGTTCTGGATGGACATTGGACAACCAAGGGACTATATCACTGGCTTGAGGCTCTACCTAGATTCATTAAGGAAGAAGTCTCCTTCTAAGTTGGCCAGTGGCCCTCACATTGTGGGTAATGTCATTGTGGATGAGACTGCTAAAATTGGTGAGGGGTGTCTAATTGGACCTGATGTTGCAATTGGTCCTGGCTGTGTTGTTGAGTCAGGTGTTAGGCTCTCTCGTTGCACAGTAATGCGAGGAGTTCGAATTAAAAATCACTCGTGCATATCCAGCAGTATCATTGGGTGGCATTCCACTGTTGGGCAGTGGGCTCGTGTGGAAAACATGACTATTCTTGGAGAAGATGTCCATGTATGTGATGAAATTTACAGCAATGGTGGTGTGGTTTTGCCCCACAAGGAGATTAAGTCAAGCATTCTGAAGCCAGAGATAGTCATGTGA 1086 0.4448 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKATGVSEVVLAINYQPEVMLNFLKEFEAKLGIKITCSQETEPLGTAGPLALARDKLMDDSGEPFFVLNSDVISEYPLKEMIAFHKAHGGEASIMVTKVDEPSKYGVVVMEETTGQVEKFVEKPKLFVGNKINAGIYLLNPSVLDRIHLRPTSIEKEVFPKIAGEKKLYAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSPSKLASGPHIVGNVIVDETAKIGEGCLIGPDVAIGPGCVVESGVRLSRCTVMRGVRIKNHSCISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2450 361 Pfam Bacterial transferase hexapeptide (six repeats) 261 295 IPR001451 -
Sto9g2450 361 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 1 361 - -
Sto9g2450 361 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 233 IPR029044 -
Sto9g2450 361 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1 312 IPR029044 -
Sto9g2450 361 Gene3D Hexapeptide repeat proteins 237 356 - -
Sto9g2450 361 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE FAMILY PROTEIN-RELATED 1 361 - -
Sto9g2450 361 Pfam Nucleotidyl transferase 2 229 IPR005835 GO:0009058|GO:0016779
Sto9g2450 361 CDD M1P_guanylylT_B_like_N 1 234 IPR045233 GO:0004475|GO:0005525|GO:0009298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2450 Sto-Chr9 27419546 27421180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2450 1 345 Eukaryotic Initiation Factors Gene Family AT4G18300 20.611 4.20e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2450 K00966 - csin:114268393 691.034