Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2446 ATGACCACACAAGGGCAGGCAGGGATTGACCATGCTGTGCTTGATGATATAATCAGACGGCTCACAGAAGTCCGATTATCCAGACCCGGAAAACAGGTTCAGCTCTCTGAGACCGAGATCAAGCAGCTTTGTATTGCTTCTAGAGATATCTTTGTTCAGCAGCCTAATTTGCTTGAACTCGAAGCTCCCATCAAAATTTGCGGTGACATTCATGGGCAGTATAGTGACTTATTAAGGCTCTTTGAGTATGGGGGTTTTCCTCCTAGCTCTAACTATCTTTTTTTAGGAGACTATGTTGATCGTGGGAAGCAAAGCTTAGAAACCATATGCCTTTTACTAGCCTATAAAATCAAATATCCAGAGAACTTTTTCCTTTTGAGGGGAAACCATGAATGTGCTTCCATTAATAGGATATATGGATTTTATGATGAATGTAAGCGACGGTTCAATGTGAGGCTTTGGAAATCTTTTACAGACTGTTTTAACTGCCTTCCTGTGGCAGCCCTTGTAGATGACAAAATATTGTGCATGCATGGTGGTCTTTCCCCTGACCTAACAAACTTGGATCAAATTAGAAATCTACCTCGTCCTACTGTTGTTCCAGACACAGGGTTGCTCTGTGATTTGCTGTGGTCAGATCCTGGTAGAGATGTGAAGGGATGGGGTATGAATGATAGAGGAGTCTCATACACCTTTGGCCCTGATAAGGTGGCTGAATTTTTGACAAAGCATGACTTGGACCTTGTCTGTCGCGCTCATCAGGTAGTAGAGGATGGGTATGAATTCTTTGCCGACAGGCAACTTGTCACAATATTTTCAGCTCCTAACTACTGTGGTGAGTTTGACAATGCTGGTGCCATGATGAGTGTGGATGAGAACTTGATGTGCTCTTTCCAGATTCTCAAGCCTGCAGAGAAAAAAGCAAAGTTCATGATGTCAAACAAAATGTGA 951 0.428 MTTQGQAGIDHAVLDDIIRRLTEVRLSRPGKQVQLSETEIKQLCIASRDIFVQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPSSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKSFTDCFNCLPVAALVDDKILCMHGGLSPDLTNLDQIRNLPRPTVVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVAEFLTKHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPAEKKAKFMMSNKM 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2446 316 Pfam Serine-threonine protein phosphatase N-terminal domain 14 61 IPR031675 -
Sto9g2446 316 PRINTS Serine/threonine phosphatase family signature 63 90 IPR006186 GO:0016787
Sto9g2446 316 PRINTS Serine/threonine phosphatase family signature 92 119 IPR006186 GO:0016787
Sto9g2446 316 PRINTS Serine/threonine phosphatase family signature 125 149 IPR006186 GO:0016787
Sto9g2446 316 PRINTS Serine/threonine phosphatase family signature 159 185 IPR006186 GO:0016787
Sto9g2446 316 PRINTS Serine/threonine phosphatase family signature 188 215 IPR006186 GO:0016787
Sto9g2446 316 PRINTS Serine/threonine phosphatase family signature 245 265 IPR006186 GO:0016787
Sto9g2446 316 PRINTS Serine/threonine phosphatase family signature 267 283 IPR006186 GO:0016787
Sto9g2446 316 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 7 309 - -
Sto9g2446 316 ProSitePatterns Serine/threonine specific protein phosphatases signature. 126 131 IPR006186 GO:0016787
Sto9g2446 316 Gene3D - 6 314 IPR029052 -
Sto9g2446 316 SMART pp2a_7 35 305 IPR006186 GO:0016787
Sto9g2446 316 SUPERFAMILY Metallo-dependent phosphatases 23 310 IPR029052 -
Sto9g2446 316 Pfam Calcineurin-like phosphoesterase 63 255 IPR004843 GO:0016787
Sto9g2446 316 CDD MPP_PP1_PPKL 13 303 - -
Sto9g2446 316 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2446 Sto-Chr9 27389174 27391374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2446 42 251 Calmodulin-binding Proteins AT5G63870 29.200 3.37e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2446 K06269 - pop:7458113 630.172