Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2413 ATGGAAACTCTGTATCCATCTGATTTCACGTCAAACCCAAAATGTTATGTCCAAGAGACGAAAAACTCAGAATGGAgtagagaagagaataagaagttTGAAAGTGCCCTTGCCATATACGATAAGGACACCCCAGACCGATGGTTGAAGGTAGCTTCCATGATCCCTGGGAAGTCTGTGTATGATGTGATCAAACAGTACAAAGAGTTAGAAGAAGATGTGTGTGAAATTGAAGCAGGTAGGGTTCCCATTCCTGGATATATTCACACTTATCATGATGCTTACAGAAAGAGGCCTCCATCTGTTAAATCTTATGATCAGGAGAGAAAGAAAGTGAAGTATGGAAAAGGAGACTGGAGAAATATCTCTAGGAATTTTGTGATGACAAAGACTCCCACTCAAGTGGCAAGCCATGCTCAGAAGTACTTCATAAGGCAGAAGCTTGGTGGAGAAGGGAAAGACAAGAGGAGACCTAGCATCCATGACATAACCATTGTGAATCACACACAATATGCAACACAAGATAATAACAAGCACCTTGTATTCAACAACTCTGCCATGCCAAAACTACAAAAGAACTGGAATCAACATATTGATGATTATGGTTCAGTCCTGGTTTGCAACCCAAACTATGAACGTTTGTTCATGTCATCTTCGTCTGTTATTGCTTCAAGATCAAAGGCTCTTAATAATAAACTGCAAGAGCAAGATCTCTATGACTGTGCTTTCCGTGAGGCTCTTGACCTTAAGGAGGAAGCTATTTATGGTATTCATGCATTGTACTACCAGCTCTGA 795 0.3962 METLYPSDFTSNPKCYVQETKNSEWSREENKKFESALAIYDKDTPDRWLKVASMIPGKSVYDVIKQYKELEEDVCEIEAGRVPIPGYIHTYHDAYRKRPPSVKSYDQERKKVKYGKGDWRNISRNFVMTKTPTQVASHAQKYFIRQKLGGEGKDKRRPSIHDITIVNHTQYATQDNNKHLVFNNSAMPKLQKNWNQHIDDYGSVLVCNPNYERLFMSSSSVIASRSKALNNKLQEQDLYDCAFREALDLKEEAIYGIHALYYQL 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2413 264 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 247 - -
Sto9g2413 264 Gene3D - 17 84 - -
Sto9g2413 264 SUPERFAMILY Homeodomain-like 113 147 IPR009057 -
Sto9g2413 264 SMART sant 101 145 IPR001005 -
Sto9g2413 264 SMART sant 21 73 IPR001005 -
Sto9g2413 264 CDD SANT 24 70 IPR001005 -
Sto9g2413 264 ProSiteProfiles Myb-like domain profile. 17 71 IPR001005 -
Sto9g2413 264 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 113 146 IPR006447 GO:0003677
Sto9g2413 264 SUPERFAMILY Homeodomain-like 23 77 IPR009057 -
Sto9g2413 264 Gene3D - 107 148 - -
Sto9g2413 264 CDD SANT 113 143 IPR001005 -
Sto9g2413 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 113 147 IPR017930 -
Sto9g2413 264 ProSiteProfiles SANT domain profile. 20 74 IPR017884 -
Sto9g2413 264 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 247 IPR043363 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2413 Sto-Chr9 27203800 27204730 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto9g2413 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2413 - - ccaj:109813886 295.434