Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2403 atgaatatggaTGAGGAGGGTGATGAGGGAGGGTTTTATATGAGAAGTAGTAGTGGAAATGGTGGCGGTGGGAGTAAGTGTGGGCGTTGGAATCCCACAGCAGAACAGgtgaagcttctcactgaaCTCTTCAGGTCTGGACTCAGAACCCCAACCACTGATCAGATTCAAAAGATCTCCACTCAGCTCAGCTTTTATGGAAAGATTGAGAGCAAGAATGTCTTCTATTGGTTCCAGAACCATAAAGCTAGGGAAAGGCAGAAGCGTCGCAAAGTCTCCACCTTTCGTCAcactaataatattattattcctCCAAAATCTACATCATCAAacattaataataataatttgaggaATACTCGAGTTTCGGAGCCGGAGAGAGTAATAGAGACACTCCAACTCTTCCCTTTGAACTCCTTTTGTGAATCAGAAACGGATCAGAAGGTGAGAGTGCATGCGAATTGTAGGGACAATTCCATGTTTTGCTACACACATCATCCTCATGGTCATGGGGACCCAATGGAACACCCACCCTTGGATCTGCGCTTGAGCTTTCTCTGA 561 0.4082 MNMDEEGDEGGFYMRSSSGNGGGGSKCGRWNPTAEQVKLLTELFRSGLRTPTTDQIQKISTQLSFYGKIESKNVFYWFQNHKARERQKRRKVSTFRHTNNIIIPPKSTSSNINNNNLRNTRVSEPERVIETLQLFPLNSFCESETDQKVRVHANCRDNSMFCYTHHPHGHGDPMEHPPLDLRLSFL 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2403 186 SMART HOX_1 25 92 IPR001356 GO:0003677
Sto9g2403 186 SUPERFAMILY Homeodomain-like 24 92 IPR009057 -
Sto9g2403 186 MobiDBLite consensus disorder prediction 1 30 - -
Sto9g2403 186 Gene3D - 26 93 - -
Sto9g2403 186 CDD homeodomain 29 89 IPR001356 GO:0003677
Sto9g2403 186 ProSiteProfiles 'Homeobox' domain profile. 23 88 IPR001356 GO:0003677
Sto9g2403 186 Pfam Homeodomain 27 87 IPR001356 GO:0003677
Sto9g2403 186 PANTHER WUSCHEL-RELATED HOMEOBOX 7 10 167 - -
Sto9g2403 186 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 10 167 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2403 Sto-Chr9 27136955 27137620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2403 20 186 Wox Gene Family AT3G11260 57.955 3.42e-58 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Sto9g2403 Homeodomain 9.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2403 - - gmx:100820304 206.838