Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2395 ATGGCGATGAAACCTTGTAAGGTGGCTTACGATTCTAAGCTATGGAAGCTTTTGAAGGAGTACAGCCAGATAGTGGTGGTGGCTGTCGACAACGTCGGATCCAACCACCTTCAGAACATTCGAAGGAATCTTCAAGGCGACTCTGTGATGGTCATGGGTAAGAATTCCCTGATGCGCCGCTCCATCAAAATGGATGCTCACTCATCCCCTAACAACGCCTTCCTCAACCTCCTCCCCCTTCTCGTTGGCAACGTGGCTTTAATTTTCACGAAAGCTGATATGAAGGAGCTCAGTGAAGAGATTGCCAAGTTTGAGGTTGTCCATCCTCTTGTGATGTGCCCAAAGTTCGTGTCATACGAATCATACCGCAATTGTTTGTTTATGAGGTCGAGACAGTTACCTTTGGGCCTCACATGCTGTCAGCAGCAGCTGCTTCCCCAGACTGCTGATCCTCTTCTCTTGTGTCAACAGTTCTTGCCGTACAACAATTGTTTTATGATGAGATCAAGGCAATTTTTGATCATGAGCGTATGGGCTCCTATCCTTTATTTCGCTGGTACCTTATGA 567 0.4691 MAMKPCKVAYDSKLWKLLKEYSQIVVVAVDNVGSNHLQNIRRNLQGDSVMVMGKNSLMRRSIKMDAHSSPNNAFLNLLPLLVGNVALIFTKADMKELSEEIAKFEVVHPLVMCPKFVSYESYRNCLFMRSRQLPLGLTCCQQQLLPQTADPLLLCQQFLPYNNCFMMRSRQFLIMSVWAPILYFAGTL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2395 188 PANTHER RIBOSOMAL PROTEIN L10P-RELATED 1 185 - -
Sto9g2395 188 SUPERFAMILY Ribosomal protein L10-like 3 107 IPR043141 -
Sto9g2395 188 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 185 - -
Sto9g2395 188 Pfam Ribosomal protein L10 7 104 IPR001790 -
Sto9g2395 188 Gene3D - 3 121 IPR043141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2395 Sto-Chr9 27100250 27101260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2395 1 109 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 61.062 8.38e-43 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2395 K02941 - csv:101214032 131.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2395 9 27100250 27101260 Sto5g1537 5 10654658 10656535 ECH
Sto9g2395 9 27100250 27101260 Sto9g2395 9 27100250 27101260 ECH