Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2385 atgggAAGGCAACCATGCTGTGACAAAGTGGGATTGAAGAAGGGACCATGGACGGCAGAGGAAGACAAGAAGCTCATCAACTTCATCCTCACCAATGGCCAATGTTGCTGGAGAGCTGTCCCTAAACTTGcagGGCTATTAAGATGTGGGAAAAGTTGTAGGCTGAGATGGACTAACTACCTCAGGCCTGACTTGAAGAGAGGCCTTCTCTCTGattatgaagagaaaatggtgattgATCTTCATGCTCAACTTGGAAACAGTGATACACATGGAAGGCGCGTGGGGTTAGCAAACGCGTCTTATGGGTCGGGATTATACAGCTCCGTCCTTGAGAAAGAGCAAAGAGAGGGCAGCATTTCAAccgaaaatataaaatga 381 0.4252 MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSDYEEKMVIDLHAQLGNSDTHGRRVGLANASYGSGLYSSVLEKEQREGSISTENIK 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2385 126 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Sto9g2385 126 Gene3D - 11 67 - -
Sto9g2385 126 CDD SANT 16 61 IPR001005 -
Sto9g2385 126 SMART sant 13 63 IPR001005 -
Sto9g2385 126 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Sto9g2385 126 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Sto9g2385 126 SUPERFAMILY Homeodomain-like 15 88 IPR009057 -
Sto9g2385 126 PANTHER MYB TRANSCRIPTION FACTOR-RELATED 1 87 - -
Sto9g2385 126 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2385 Sto-Chr9 27018311 27023535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2385 1 87 MYB Transcription Factor Family AT1G66230 96.552 1.67e-61 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto9g2385 Myb_DNA-binding 1.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2385 K09422 - csin:114262393 190.274