Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2376 ATGCCAGGGAATAAGGTGATGCAGGAGGTGGTGGAGGAGAAGGAAGGGGAAGAGAAAGGGAAGCAAATGGCGTCGTCTTCGAGATCATCTTCTTCGCGGTCGTCGCTGTCTTCTTCATCGTCGTCTTCCGATGAGAGAGAGTATGAAGTTCAGGACCTGAGAGATAGGTTGAAATCGTCTCGAGGAAGCCGATTCCAATTAATAGAGAACGAGTTTGGACTCAATTTGACTCGGATGAAGTTCAGCCGCCAAGTCCTCCTTCAAGGCATCCGAGGCCTGTCCAAAGATTTCATTATTCATCCAGAAAACAGGTGGTATCGGGCATGGACTAAGTTCATATTGCTGTGGGCAATATACTCATCGTTCTTCACCCCAATGGAGTTTGGATTTTTTCGTGGGCTGCCTGAGAATCTCTTTATACTGGACATAATTGGACAAATAGCGTTTCTTGTAGACATTGTTTTGACGTTCTTTGTTGCTTATAGAGACAGTCAGACCTATCGTATGATCTACAAGCGAACCCCTATAGCTCTGCGGTATCTAAAATCTAGCtttatctttgattttcttGGATGTCTGCCTTGGGACATGATCTACAAGGCTTGTGGAAGAACAGAGGAAGTAAGGTATCTTTTATGGATCAGATTATATCGAGTGCGTAAAGTCAATGAATTTTTCCAGAAGATGGAGAAGGATATACGAATCAATTACATGTTTACTAGGATTGCTAAACTTTTAGTAGTTGAACTCTACTGCACGCATACGGCAGCCTGCATCTTCTACTTTTTGGCCACCACACTACCTGAATCCCAAGAGGGGTACACATGGATAGGAAGTTTAAAGCTAGGTGACTACAGTTATTCACATTTCAGAGAAATCGATCTCTGGAAGCGCTACACAACTTCTTTGTATTTCGCAATTGTTACAATGGCTACTGTTGGCTATGGAGATATACATGCAGTCAATCTGAGGGAGATGATATTCATAATGATATATGTTTCCTTTGACATGGTTCTTGGTGCTTATTTAATTGGTAACATGACGGCTTTGATAGTTAAAGGATCAAAGACTGAGAAGTTTAGGGATAGAATGACAGATCTTATGAAATATATGAATAGAAACAGACTTGGAAGGGACATCAGGGAACAAATAAAAGGCCATATGCGCTTACAGTATGAGAGTAGCTACACTGAGCCTGCTGTCCTTCAGGACATCCCCATTTCTATTCGCTCCAAGatATCCCAAGAATTATATTTGCCATACATTGAAAAGGTTTCTCTGTTTAAGGGTTGCTCTTCAGAATTCATCAATCAGATTGTTATTAGGCTCCATGAGGAATTCTTTCTCCCAGGAGAAGTGATATTGGAACAAGGAAATGTTGTAGATCAACTATACTTTGTCTGTCATGGTGTAGTGGAGGAAGTAGGCCCAGGTGAAGATGGAACTGAAGAGACCGTTTCACTTTTACAACCTAACAGTTCATTTGGGGAAATATCTATTCTATGTAACATTCCTCAGCCATATACCGTTCGGGTTTGTGAACTATGTAGGCTTCTGCGGCTTGATAAACAATCATTTACTGATGTCCTTGATATATACTTTTATGATGGGAGAAAAGTATTAAACAACCTTCTAGAGGGAAAAGAATCTATTCGAGGCAAGCAATTGGAGTCAGACATCACATTCCATATTGGAAAGCAAGAAGCTGAACTTGCTTTGAAAGTCAATAGTGCAGCATTCAATGGGGATCTGTATCAACTTAAAGGTTTGATTCGAGCTGGAGGTGATCCAAACAAGACAGACTATGATGGACGGTCACCATTGCATCTTGCGACATCTAGAGGATATGAAGATATCACACTTTTCCTTATTCAAGAAGGTGTAAATATTGATATTAAAGATAACTTTGGTAACACACCCTTACTTGAAGCTGTAAAGAATGGAAACGATCGAATTGCTTCCATACTTGTTGAAAAGGGGGCTTCCATTAAGATAGAGAATGCTGGTAGTTTTCTATGTAATGCTGTTGCAAGGGGAGATTCAGATTTTCTTAAAAGGCTTCTATCTTATGGCATGGATCCTAATTTGAAAGATTATGATTACCGAAGCCCTCTTCATCTCGCTGCAGCCGAGGGTTTATTCTTCATGGCAAAGTTGCTATTAGAAGCTGGAGCTAGTGTTTTTATCAAAGACAGATGGGGAAATACCCCACTTGATGAAGCCCGAATGTGTGGAAATAAGAATCTGATCAAGCTACTGGAAGGTGCAAAGTCAGCTCAGCTGTCAGAATTACCACATCCCTCCTCAGAATTTACAGATAGATTTCACCCAAGGAAATGCACAGTCTTTCCTTTCCACCCGTGGGATCCAAAAGAACATAGAAGACATGGAATTGTACTATGGATTCCACAAACCATTGAAGAGCTTATCAAAGAAGCAACAGAGCAGCTAGAAATTTCTAATGATTGTTGTATTTTATCAGAAGATGCTGGTAAAATTACAGATGTGAACATGATTAAGGATGGTCAAAAGCTCAATCATAACCCTTACAAATCATCTGGAACCATGTGCCTGAATGAAGCCTATTGTGAAGGCGTGATTGAAAAGCAGCAGCAAAAAGCTGAGCTATTGACTCCATCAGGAAGCTCAATATGGGCAAGCTCGAGCAAACAAGTAAACCCACTCTCAAATTCATGGATAATAATAGCTCCTTAA 2715 0.4037 MPGNKVMQEVVEEKEGEEKGKQMASSSRSSSSRSSLSSSSSSSDEREYEVQDLRDRLKSSRGSRFQLIENEFGLNLTRMKFSRQVLLQGIRGLSKDFIIHPENRWYRAWTKFILLWAIYSSFFTPMEFGFFRGLPENLFILDIIGQIAFLVDIVLTFFVAYRDSQTYRMIYKRTPIALRYLKSSFIFDFLGCLPWDMIYKACGRTEEVRYLLWIRLYRVRKVNEFFQKMEKDIRINYMFTRIAKLLVVELYCTHTAACIFYFLATTLPESQEGYTWIGSLKLGDYSYSHFREIDLWKRYTTSLYFAIVTMATVGYGDIHAVNLREMIFIMIYVSFDMVLGAYLIGNMTALIVKGSKTEKFRDRMTDLMKYMNRNRLGRDIREQIKGHMRLQYESSYTEPAVLQDIPISIRSKISQELYLPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVILEQGNVVDQLYFVCHGVVEEVGPGEDGTEETVSLLQPNSSFGEISILCNIPQPYTVRVCELCRLLRLDKQSFTDVLDIYFYDGRKVLNNLLEGKESIRGKQLESDITFHIGKQEAELALKVNSAAFNGDLYQLKGLIRAGGDPNKTDYDGRSPLHLATSRGYEDITLFLIQEGVNIDIKDNFGNTPLLEAVKNGNDRIASILVEKGASIKIENAGSFLCNAVARGDSDFLKRLLSYGMDPNLKDYDYRSPLHLAAAEGLFFMAKLLLEAGASVFIKDRWGNTPLDEARMCGNKNLIKLLEGAKSAQLSELPHPSSEFTDRFHPRKCTVFPFHPWDPKEHRRHGIVLWIPQTIEELIKEATEQLEISNDCCILSEDAGKITDVNMIKDGQKLNHNPYKSSGTMCLNEAYCEGVIEKQQQKAELLTPSGSSIWASSSKQVNPLSNSWIIIAP 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2376 904 Pfam Ankyrin repeats (3 copies) 578 666 IPR002110 GO:0005515
Sto9g2376 904 Pfam Ankyrin repeats (3 copies) 672 753 IPR002110 GO:0005515
Sto9g2376 904 ProSiteProfiles KHA domain profile. 779 865 IPR021789 -
Sto9g2376 904 SMART cnmp_10 427 545 IPR000595 -
Sto9g2376 904 MobiDBLite consensus disorder prediction 1 48 - -
Sto9g2376 904 MobiDBLite consensus disorder prediction 23 44 - -
Sto9g2376 904 MobiDBLite consensus disorder prediction 8 22 - -
Sto9g2376 904 ProSiteProfiles Ankyrin repeat region circular profile. 603 635 - -
Sto9g2376 904 PANTHER POTASSIUM CHANNEL AKT1 41 845 IPR045319 GO:0005249|GO:0006813
Sto9g2376 904 Gene3D - 560 668 IPR036770 -
Sto9g2376 904 Pfam Ion transport protein 107 352 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Sto9g2376 904 Gene3D - 109 353 - -
Sto9g2376 904 ProSiteProfiles Ankyrin repeat profile. 636 668 IPR002110 GO:0005515
Sto9g2376 904 SUPERFAMILY cAMP-binding domain-like 355 544 IPR018490 -
Sto9g2376 904 Pfam Cyclic nucleotide-binding domain 447 531 IPR000595 -
Sto9g2376 904 Gene3D Helix hairpin bin 354 410 - -
Sto9g2376 904 SUPERFAMILY Ankyrin repeat 577 754 IPR036770 -
Sto9g2376 904 PANTHER POTASSIUM CHANNEL SKOR-LIKE 41 845 - -
Sto9g2376 904 ProSiteProfiles cAMP/cGMP binding motif profile. 427 547 IPR000595 -
Sto9g2376 904 ProSiteProfiles Ankyrin repeat region circular profile. 700 732 - -
Sto9g2376 904 Pfam KHA, dimerisation domain of potassium ion channel 778 845 IPR021789 -
Sto9g2376 904 CDD CAP_ED 427 541 IPR000595 -
Sto9g2376 904 PRINTS EAG/ELK/ERG potassium channel family signature 142 152 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto9g2376 904 PRINTS EAG/ELK/ERG potassium channel family signature 251 261 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto9g2376 904 PRINTS EAG/ELK/ERG potassium channel family signature 299 316 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto9g2376 904 PRINTS EAG/ELK/ERG potassium channel family signature 343 352 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto9g2376 904 Gene3D Jelly Rolls 411 549 IPR014710 -
Sto9g2376 904 ProSiteProfiles Ankyrin repeat profile. 603 635 IPR002110 GO:0005515
Sto9g2376 904 SUPERFAMILY Voltage-gated potassium channels 101 352 - -
Sto9g2376 904 ProSiteProfiles Ankyrin repeat region circular profile. 636 667 - -
Sto9g2376 904 SMART ANK_2a 700 729 IPR002110 GO:0005515
Sto9g2376 904 SMART ANK_2a 667 696 IPR002110 GO:0005515
Sto9g2376 904 SMART ANK_2a 636 665 IPR002110 GO:0005515
Sto9g2376 904 SMART ANK_2a 603 632 IPR002110 GO:0005515
Sto9g2376 904 SMART ANK_2a 733 763 IPR002110 GO:0005515
Sto9g2376 904 Gene3D - 669 756 IPR036770 -
Sto9g2376 904 ProSiteProfiles Ankyrin repeat profile. 700 732 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2376 Sto-Chr9 26940997 26948244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2376 646 756 Ion Channels AT5G37500 35.714 1.42e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2376 K21867 - gmx:100814385 1452.19