Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2375 ATGTCTTTCTCTCTCATCGAAACCTGTAGAAAGAGAAAACGATGGCCCAAGGTTTTCAGGTTTCACTCTTTCGCCGACCCTGGTTGCCCTATCAATCCAACCGGACCTTTCCGAGATAACATTCGTCTCTTCCTTCAAGAATGTGGAGAGCTTGAAGATTACCATATCCAAGGCATGCCCTTATGGTGCACACTTCTTATTCACGAGAAATCGAACTTCATGACCCCTCTTTACACCATTGAAGACAACGTCTACCACTCTGCCCATCCCTTCTGCGACCATTGCCGATGTGCAGGGTGGAGCGGCCATTTTGTGTCCAAGAGGAGGTACCATTTCATTATCCCCATCGATAATAAACCGTTGGATGAAGGTTTTATTGATAATCAGAGCCATCTCTTGCATGGGTTGATTCATTGTAATGGGTATGGTCATTTGCTCTGTATCAATGGCATTGAAGGGGGTTCCAAGTTTCTTAGTGGCAGAGAAATCATGGATCTCTGGGATAGAATCTGTATAAATCTTCGAGCAAGGAGAATTGCAGTTGAAGATACATCAAAGAAGCGCTCTATGGATCTTCGCTTACTCCATGGAATTGCTTATGGGCATTCATGGTTCGGTAGGTGGGGCTACAGATTTTGTAGGGGAAGTTTTGGAGTGACAGATCACAATTACAATGCAGCAATCGAACTTGTAAGCTCGTTGGAGCTTGACGAGGTGCTTCAATATTTCAGTAAGACAATTTGCCATAAGGAAATCAAGCAAATAATCCGCTACTACAGAGATATGAGTGAAACTCAATTGATCACTATCAAGGATCTTCTAAGGTTTATGCTCACCATCAAGTCTCGTGCTCCTCCACCCAAGAAAGCAGCTCCTCCTACTTCGACCTTCATCTCTAGAAACTCAACCAGAAATGCAATCTCAAGCAAGCCAAACCCAATGAAGGAAAAATCAGTGAGGTACAAAAAGTTCAGTTCAGCAGTGTCTAATATGGATAGTAGGTGGCCTGCAAGGAGACTAGAATACGCAGCCCAAGTGATTGTGGATGCACTGAAGGAGAACAAGACAAATGGTTCGGGTTCTAGTGGGATGACTAGACAAGATGTGAGAGATGCAGCTAGGCTTCACATTGGTGACACTGGGTTGCTGGATTATGTGTTGAAATCACTCAACAATGTGATTGTAGGAAACTATGTGGTTCGTCGGATGGTGAACCCCACAACTCGAATCCTAGAGTATAACATTCATGAGCTGGGAAATGGGTGCAAAGCACCTGAACCACCAGAGCCTGAGATGAAGGTTCTTGTGGAGCCTCCAGAAGAGTCAGATCAAGTGCCTGGAATTGATGTTTACAGTGATGTGGTGTATTTGTACAAGAATGTCTTATTGGGTTACCCAGATTCAGAACCGGTGGATTTGGCAGTCCAGACCATTCTAGACAGTAGGCATTTTGTGAAGGAATGGACATTAATTGATGAAATAGAGCAAGTTTTGACATTCTTTTGTCGGTTGAAACCCAACTTCATTGATATCAAATCAGAGTTGAACAAGGAAGTAAACCCAGGGGAGATGGTGATGGTTCCTTTGCATGCTACAGTAGGGGAGTTGAAGCAAGCAGCTGAGAGTGCTCTGAGGGACACTTACTGTATTGCAGAGAGAGTTATGGTGATTGAGATTACAGAGTTGGTTGGAGTTAGTGATGAGGAAGTGCTTTTTGGAGTGGTGGAGTCAGGCGTGGAAGTTTGTGTGAGGGGAATTGGTATAGATTTGGATACTCCGTTGAAGTATCAGGGAGGGGCTGATAATTGGAAAGTGAGATGTGAATGTGGAGCTCAGGATGATGATGGGGAGAGAATGGTGGCATGTGATATTTGTGAGGTGTGGCAGCATACAAGGTGTTGTGGGATTGATGACTCAGAGACAGTGCCTCCATTGTTTGTGTGCACTGGGTGTTGTGATTCACTTGTGCCCCCAAGGATTGAATCTGCCTTCTGTGATAGTAGCATGGACTGTGCTGATGATTTTTTGATTTCCCCAGAGCCTGACCACTTGATGGAGTTTGGGTATGGATACTGA 2076 0.4451 MSFSLIETCRKRKRWPKVFRFHSFADPGCPINPTGPFRDNIRLFLQECGELEDYHIQGMPLWCTLLIHEKSNFMTPLYTIEDNVYHSAHPFCDHCRCAGWSGHFVSKRRYHFIIPIDNKPLDEGFIDNQSHLLHGLIHCNGYGHLLCINGIEGGSKFLSGREIMDLWDRICINLRARRIAVEDTSKKRSMDLRLLHGIAYGHSWFGRWGYRFCRGSFGVTDHNYNAAIELVSSLELDEVLQYFSKTICHKEIKQIIRYYRDMSETQLITIKDLLRFMLTIKSRAPPPKKAAPPTSTFISRNSTRNAISSKPNPMKEKSVRYKKFSSAVSNMDSRWPARRLEYAAQVIVDALKENKTNGSGSSGMTRQDVRDAARLHIGDTGLLDYVLKSLNNVIVGNYVVRRMVNPTTRILEYNIHELGNGCKAPEPPEPEMKVLVEPPEESDQVPGIDVYSDVVYLYKNVLLGYPDSEPVDLAVQTILDSRHFVKEWTLIDEIEQVLTFFCRLKPNFIDIKSELNKEVNPGEMVMVPLHATVGELKQAAESALRDTYCIAERVMVIEITELVGVSDEEVLFGVVESGVEVCVRGIGIDLDTPLKYQGGADNWKVRCECGAQDDDGERMVACDICEVWQHTRCCGIDDSETVPPLFVCTGCCDSLVPPRIESAFCDSSMDCADDFLISPEPDHLMEFGYGY 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2375 691 MobiDBLite consensus disorder prediction 285 313 - -
Sto9g2375 691 SMART PHD_3 606 652 IPR001965 -
Sto9g2375 691 MobiDBLite consensus disorder prediction 294 312 - -
Sto9g2375 691 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 11 658 - -
Sto9g2375 691 ProSitePatterns Zinc finger PHD-type signature. 607 651 IPR019786 -
Sto9g2375 691 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 594 655 IPR013083 -
Sto9g2375 691 SUPERFAMILY FYVE/PHD zinc finger 599 657 IPR011011 -
Sto9g2375 691 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 11 658 - -
Sto9g2375 691 CDD PHD_MMD1_like 607 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2375 Sto-Chr9 26937451 26940073 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2375 10 657 PHD Transcription Factor Family AT5G22260 33.807 2.05e-121 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2375 - - mtr:MTR_5g077750 1032.71