Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2372 CTGATTGCAGTAACTGGCCGTGTGACAACTAAAGTTGATGTCTTTAGCTTTGGGGTAATATTAATGGAGCTGATAACCGGAAGGAAAGCACTAGATGAGACTCAACCCGAGGAAAGCATGCACCTTGTGTCATGGTTCCGCAGAATGTACCTAAACAAGGACTCATTCCGCAAGTCCATAGACCCCACCATCGATCTCAACGAGGAAACACTCACGAGCATCCACACCGTAGCAGAGCTAGCCGGCCACTGCTGTGCGAGGGAGCCATATCAGAGGCCTGACATGGGCCACGCTGTGAACGTTCTTTCTTCTCTTGCAGAGCTGTGGAAACCATGTGATCAGAACTCCGAAGATATCTATGGCATTGATCTTGACATGTCTCTACCACAGGCGCTTAAGAAATGGCAGGCATATGAAGGTAGAAGTCAAATggaatcttcttcttcttcgctcCTTCCCAGCTTGGACAACACCCAGACAAGCATACCAACACGTCCCTATGGCTTTGCTGAGTCCTTCACATCAGCAGATGGGAGGTGA 540 0.4722 LIAVTGRVTTKVDVFSFGVILMELITGRKALDETQPEESMHLVSWFRRMYLNKDSFRKSIDPTIDLNEETLTSIHTVAELAGHCCAREPYQRPDMGHAVNVLSSLAELWKPCDQNSEDIYGIDLDMSLPQALKKWQAYEGRSQMESSSSSLLPSLDNTQTSIPTRPYGFAESFTSADGR 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2372 179 PANTHER OSJNBA0070M12.3 PROTEIN 2 179 - -
Sto9g2372 179 ProSiteProfiles Protein kinase domain profile. 1 105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2372 179 Gene3D Transferase(Phosphotransferase) domain 1 2 123 - -
Sto9g2372 179 MobiDBLite consensus disorder prediction 144 179 - -
Sto9g2372 179 MobiDBLite consensus disorder prediction 144 168 - -
Sto9g2372 179 PANTHER RECEPTOR PROTEIN KINASE TMK1 2 179 - -
Sto9g2372 179 SUPERFAMILY Protein kinase-like (PK-like) 5 117 IPR011009 -
Sto9g2372 179 Pfam Protein tyrosine and serine/threonine kinase 6 97 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2372 Sto-Chr9 26909372 26909911 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2372 3 117 Receptor kinase-like Gene Family AT5G56890 37.391 1.94e-16 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Sto9g2372 PK_Tyr_Ser-Thr 1.4e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2372 - K00924 lja:Lj0g3v0022049.1 324.709