Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2371 ATGAAAGCAAACTTTGATCTTGAAGTGGAGGCCGTAGCAGAAAATGAACTTGAAGTTAGCAGCCAGGTTGCTTCCAATACATCTATTCATGCAAATTCTGATCTTGTTTCACTTGACTTAACTCTCAGCTTCAATAATAACGAGTTGGTAGGGGCAAGTGCAAGAGATTCCATAGGACTCTCATTCTCAAGCACTAGTGAGAGTAGCAATGAACCTGCCTCTCAAACTACTGCAGCAACTATCCCAAGAGTTTTCTCATGCAACTACTGTCAGCGCAAGTTCTTTAGCTCACAGGCTCTTGGTGGCCACCAAAATGCACACAAGAGAGAAAGATCATTGGCAAAGCAGGCTATGAGAATGGGTTTCTTCTCTGAGAGGTATGCAAATGCAAGTCTAGCGTCTCTCCCTCTTCATGGTTCTTTCAGGTCCTTGGGAATAAAAGCACACTCTTCACAGCATTATGGTTTTGCACCAACAATGAGGCCTCATGAAAGGTATACAAATGCAAGTAATGGAAGATTTGAGCAAGGGTATTTTGTTCAGCCAATATTCTTGGAGGATGATGATGCAGAACTTTTGTGGCCTGGTAGTTTCCGTCAGGTTTCAGAGgcaggtgatgAAAGTTCTGATTTGAGTTTTAGGAAGGTGAATCCATCAGTAGAGAGTGATAACTCTACACCAGATTTGACACTGAAACTTTGA 702 0.416 MKANFDLEVEAVAENELEVSSQVASNTSIHANSDLVSLDLTLSFNNNELVGASARDSIGLSFSSTSESSNEPASQTTAATIPRVFSCNYCQRKFFSSQALGGHQNAHKRERSLAKQAMRMGFFSERYANASLASLPLHGSFRSLGIKAHSSQHYGFAPTMRPHERYTNASNGRFEQGYFVQPIFLEDDDAELLWPGSFRQVSEAGDESSDLSFRKVNPSVESDNSTPDLTLKL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2371 233 SUPERFAMILY beta-beta-alpha zinc fingers 83 113 IPR036236 -
Sto9g2371 233 ProSitePatterns Zinc finger C2H2 type domain signature. 87 107 IPR013087 -
Sto9g2371 233 PANTHER ZINC FINGER PROTEIN 3-RELATED 1 233 - -
Sto9g2371 233 Gene3D Classic Zinc Finger 63 133 - -
Sto9g2371 233 ProSiteProfiles Zinc finger C2H2 type domain profile. 85 112 IPR013087 -
Sto9g2371 233 MobiDBLite consensus disorder prediction 203 233 - -
Sto9g2371 233 PANTHER ZINC FINGER PROTEIN JAGGED 1 233 IPR045320 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2371 Sto-Chr9 26896930 26897664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2371 67 233 C2H2 Transcription Factor Family AT1G66140 48.223 1.81e-48 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sto9g2371 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2371 - - gmx:100794851 310.457