Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2335 ATGGCGGCCGCGGTAGCTCAACCTATCAGTCACGAACTCATTGAGCCAGCCAACGATGTTAAGCTCTTCAATCGTTGGACTTTCGACGACGTTCAgGTGAATGACATATCTTTGGCTGATTACATTGGTGTGGCTGCTGCCAAGCATGCAACCTATGTTCCTCACACTGCCGGGAGATATTCAGTCAAGCGTTTCAGGAAAGCTCAATGCCCTATAGTGGAGAGGCTTACCAACTCTCTAATGATGCATGGGCGAAACAATGGGAAAAAGCTCATGGCAGTGAGGATCATGAAGCATGCAATGGAAATTATCCACTTGCTCACTGATCAAAATCCAATCCAAGTGATTGTTGATGCTGTGATCAACAGTGGCCCAAGGGAAGATGCTACTCGTATTGGGTCTGCCGGTGTTGTCAGACGTCAGGCAGTGGATATTTCTCCCCTACGCCGTGTAAATCAGGCAATCTATCTACTTACCACCGGTGCTCGTGAGGCTGCATTCAGGAACATTAAGACAATCGCAGAATGCTTGGCTGATGAACTTATCAACGCTGCAAAGGGGTCATcaaacagCTATGCCATTAAGAAGAAGGACGAGATTGAGAGAGTTGCCAAGGCAAACCGTTGA 627 0.4705 MAAAVAQPISHELIEPANDVKLFNRWTFDDVQVNDISLADYIGVAAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIMKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2335 208 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 1 208 IPR000235 GO:0006412
Sto9g2335 208 ProSitePatterns Ribosomal protein S7 signature. 74 100 IPR020606 GO:0003723|GO:0003735|GO:0006412
Sto9g2335 208 SUPERFAMILY Ribosomal protein S7 21 208 IPR036823 -
Sto9g2335 208 TIGRFAM uS7_euk_arch: ribosomal protein uS7 20 208 IPR005716 GO:0003735|GO:0006412|GO:0015935
Sto9g2335 208 Gene3D Ribosomal protein S7 domain 2 208 IPR036823 -
Sto9g2335 208 PANTHER RIBOSOMAL PROTEIN S7 4 208 IPR000235 GO:0006412
Sto9g2335 208 CDD uS7_Eukaryote 21 208 IPR005716 GO:0003735|GO:0006412|GO:0015935
Sto9g2335 208 PANTHER 40S RIBOSOMAL PROTEIN S5 4 208 - -
Sto9g2335 208 Pfam Ribosomal protein S7p/S5e 62 208 IPR023798 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2335 Sto-Chr9 26607501 26609131 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2335 18 208 Cytoplasmic Ribosomal Protein Gene Family AT3G11940 92.147 8.05e-134 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2335 K02989 - rcu:8285751 375.555