Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2319 ATGAAAAATGAAAGGCCGAAAACGGAAGGATCCTTATTCATATCATACACAGCTCAGTCCCTCACGAACGAGGGAAGAACTGGGATAAGGCAAGATGACGTCAATCTCGCCGCCATTATCGTCCTACTGAAAATCTCTTGCACGCCAAGTTCAAATAAAAGCAGTTCCAGTATACCGATATCAATTATCCGACTCGGGTCTCTCCGAAAGCCAAATACACAGCTTTTCTATCCTGTCTTCTTCAGCATCTCCCGTATACTCCTTGGATACTTTGGTTTTCAAGGAATGCTATCTACTGCTTCTCCTTCTGCTTACAGTGCTTACAGGAGTATCAGGGCTCCTGGGCCTCTTCAACGAGATGGTAGAGCCAGTACGGCATCACACTGTGCCGTTGCCAGATGTTGCTTTTACCACTCTGCTTTTGTTGATTTGAGTTGTGGCAATTGGAGTATCAATCGAGTTGGGTCACTCTTTAGGGTCTCTTGTATCAGCAGCTATCCAATTTACAGTAGAAGTTATGCTTATGGCTTCAGTTTCAATCTGTGCAACCTGGGCAGTTGCTCAAGTTTGCTTTCTGAGGCAAATGGGTTTCTTTCTGATTCTTCACTCTGTCGCAGAGTAACCAGACCTTACGTACCACCACGACTTGTTCGTTCAAATACTTTTCTATTCCTTTTTTCTGGCAAATTTGTGTTCTTGTTTGATGTTGACTGTGGTTTGGAACAGAGCTCAACGCTACACGGGCGAGCATTGTCGTCAACGTCAATCAAAGGTGATGATGGAAGTGGAACGGCTTCAAAGCATACAGAAACCCGGAACCAAAATATTACTTATACGAGTACCAAAGCACCTTCAGGGGAACAGATTGCTGACATAAAAATCCTCAGAACACTTGCCAATTTCTTGTGGATAAAAGATAATCTTGAACTCCGTTTCCGGGTTGTTGCTTCTCTGTGTTTTCTTGTTGCGGCTAAGGTTCTGAATGTTCAGGTCCCTTTCTTATTTAAGCTTGCAGTTGATTGGTTGACAATTGCGACAGGCAATGCCAATGCTCTTGCTTCTTTTACAGCCACAAATTCAACTCAGTTGGCTCTCTTTTCAACCCCAGCAGCAGTGTTCATTGGATATGGGATTGCACGTGCAGGATCTTCCGCTTTCAATGAACTTAGGATTGCTGTATTCTCTAAGGCAGCACTCCAAACAATCCGATTAGTATCCAGAAAGGTGTTATCACATTTGCATGACCTTGACCTTCGGTTTCATCTAAGTCGAGAAACTGGGGCGTTAAATAGAATTATTGACCGTGGTAGCCGTGCAATAAATTTCATTCTTGCATCTATGGTGTTCAATGTATTTCCCACCATAGTAGAGATATCTATGGTAGCAGGTATACTGGCTTTCAAACTTGGAGCACCGTTTGTGTGGATTACATCCCTATCAGTTGTTACGTATCTCTTTTTTACTCTGACTGTCACGCAGTGGAGGACTAAGTTCAGGAAGGCCATGAATAAAGCAGATAATGATGCAAGCTCAAGGGCTATTGATTCACTTATTAATTATGAGACTGTCAAATATTTCCATAATGAAGGTTTTGAAGCTGAAAAATATGACGAGTATCTTAAGAAGTATGAAGATGCTGCTTTGAAAACGCAGCGCAGCCTTTCTTTTCTGAACTTTGGTCAAAGTGCTATATTTAGTACGGCTCTTTCTATGGCGATGGTGTTATGTTCTCATGGAATCATGAATGGCAAGATGACTGTTGGTGATTTGGTGATGGTGAATGGACTTCTCTTCCagctctctcttcctctcactTTCCTTGGTAGTGTATATCGTGAGACTGTGCAGAGTCTAGTCGACATGAAGTCCATGTTTCAGTTACTGGAGGAAACAGCAGACATTAGGGATAAAGATGATGCAAAGCCTCTGAGATTAAATGGAGGGAGCATTCAGTTTGAAAATGTACACTTCAGTTACCTTGCAGAAAGAAAGATACTTGATGGAATATCTCTAGTAATACCAGCTGGAACGAGTGTGGCAATTGTTGGGACTAGTGGAAGTGAAAGAAAGATACTTGATGGAATATCTCTAGTAATACCAGCTGGAACGAGTGTGGCAATTGTTGGGACTAGTGGAAGTGTAACTGCAACCTGCAGGGTTTCCAGAGATGGTGGCATCCAGAGGCAGAGTGCTGATTTCCAGATTCTTACCATCTGTCAAATAGCACATATAGTGCACACTAAAAGCAATGTTGCTATACCTGTGCTACGCAAATGCAATGTCAGAAGCTTAGTAGGATCAGCATGTGATGGTGAAATCTCGATTAAAATTAAGATAGACAGTCAAGATATTAGGGAGGTAACACTTGAGAGTCTGCGGAAGTTTATTGGTGTTGTTCCTCAAGATACTGTACTTTTCAATGACACAATATTTCATAACATTCACTATGGCCGACTTTCAGCAACTAAAGAGGAGGTCTACCAAGCAGCTCAGCAGGCGGCAATCCATGACACTATTATGAATTTTCCTGAGAAATATTCAACTGTTGTGGGAGAACGAGGGCTCAAGTTAAGTGGTGGTGAGAAGCAGCGTGTCGCCCTAGCCCGTGCTTTTCTGAAAGCACCTTCAATTCTGTTGTGTGACGAAGCTACAAGTGCACTTGATAGCACAACAGAATCAAAGATTTTAAGCACATTGAAGTCTCTAGCAAAGCATAGAACTTCTGTATTTATTGCTCACAGGCTTACCACTGCAATGCAGTGTGATGAGATCATAGTCTTGGAAAATGGAAGGGTGGTCGAGCAAGGATCCCATGAAGTGCTCTTATCTAAGACAGGAAGATATGCACAGCTATGGGGACAGCAAAATAATACAATCGATGAATGA 2886 0.4203 MKNERPKTEGSLFISYTAQSLTNEGRTGIRQDDVNLAAIIVLLKISCTPSSNKSSSSIPISIIRLGSLRKPNTQLFYPVFFSISRILLGYFGFQGMLSTASPSAYSAYRSIRAPGPLQRDGRASTASHCAVARCCFYHSAFVDLSCGNWSINRVGSLFRVSCISSYPIYSRSYAYGFSFNLCNLGSCSSLLSEANGFLSDSSLCRRVTRPYVPPRLVRSNTFLFLFSGKFVFLFDVDCGLEQSSTLHGRALSSTSIKGDDGSGTASKHTETRNQNITYTSTKAPSGEQIADIKILRTLANFLWIKDNLELRFRVVASLCFLVAAKVLNVQVPFLFKLAVDWLTIATGNANALASFTATNSTQLALFSTPAAVFIGYGIARAGSSAFNELRIAVFSKAALQTIRLVSRKVLSHLHDLDLRFHLSRETGALNRIIDRGSRAINFILASMVFNVFPTIVEISMVAGILAFKLGAPFVWITSLSVVTYLFFTLTVTQWRTKFRKAMNKADNDASSRAIDSLINYETVKYFHNEGFEAEKYDEYLKKYEDAALKTQRSLSFLNFGQSAIFSTALSMAMVLCSHGIMNGKMTVGDLVMVNGLLFQLSLPLTFLGSVYRETVQSLVDMKSMFQLLEETADIRDKDDAKPLRLNGGSIQFENVHFSYLAERKILDGISLVIPAGTSVAIVGTSGSERKILDGISLVIPAGTSVAIVGTSGSVTATCRVSRDGGIQRQSADFQILTICQIAHIVHTKSNVAIPVLRKCNVRSLVGSACDGEISIKIKIDSQDIREVTLESLRKFIGVVPQDTVLFNDTIFHNIHYGRLSATKEEVYQAAQQAAIHDTIMNFPEKYSTVVGERGLKLSGGEKQRVALARAFLKAPSILLCDEATSALDSTTESKILSTLKSLAKHRTSVFIAHRLTTAMQCDEIIVLENGRVVEQGSHEVLLSKTGRYAQLWGQQNNTIDE 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2319 961 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 650 954 IPR003439 GO:0005524
Sto9g2319 961 CDD ABC_6TM_ATM1_ABCB7 317 624 - -
Sto9g2319 961 Coils Coil 960 961 - -
Sto9g2319 961 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 625 687 IPR027417 -
Sto9g2319 961 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 262 688 IPR039421 -
Sto9g2319 961 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 776 957 IPR039421 -
Sto9g2319 961 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 688 717 IPR039421 -
Sto9g2319 961 SUPERFAMILY ABC transporter transmembrane region 309 630 IPR036640 GO:0005524|GO:0016021
Sto9g2319 961 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 315 616 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto9g2319 961 Pfam ABC transporter 776 885 IPR003439 GO:0005524
Sto9g2319 961 ProSitePatterns ABC transporters family signature. 857 871 IPR017871 GO:0005524
Sto9g2319 961 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 776 955 IPR027417 -
Sto9g2319 961 PANTHER ABC TRANSPORTER OF THE MITOCHONDRION 1-RELATED 688 717 - -
Sto9g2319 961 PANTHER ABC TRANSPORTER OF THE MITOCHONDRION 1-RELATED 776 957 - -
Sto9g2319 961 PANTHER ABC TRANSPORTER OF THE MITOCHONDRION 1-RELATED 262 688 - -
Sto9g2319 961 Gene3D ABC transporter type 1, transmembrane domain 301 640 IPR036640 GO:0005524|GO:0016021
Sto9g2319 961 Gene3D - 641 689 IPR027417 -
Sto9g2319 961 MobiDBLite consensus disorder prediction 255 275 - -
Sto9g2319 961 Gene3D - 776 957 IPR027417 -
Sto9g2319 961 Pfam ABC transporter transmembrane region 315 603 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2319 Sto-Chr9 26520008 26534838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2319 460 956 Calmodulin-binding Proteins AT2G36910 29.183 8.97e-44 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2319 K05662 - gmx:100787870 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2319 9 26520008 26534838 Sto9g2319 9 26520008 26534838 ECH