Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2309 ATGCCCTCCATGTTTCAAATCCCACTCTTTCTAGATGACGCTTACTTCGTCCTCTGGTTTCATCTGCTTTGCGGAAATTGGGAAGCTTTGTTTCGTTCAAAacggtttggtttggaggttaataacttaatattctttagtTGCGTGTACATGGGAATGGGATGGGGGATGTATCTCTCAAAGTGTTGTTGGAAGTATGAAGTTGTTTTCTGCTTATGGTTGTGGTGTTATTTGCTGCTGGTTGCCGCAAAGGACCCTGTCACACACCCCACTGAAGTTGGAGCATTGAAAGCCATCAAGGGAAGTTTGATTGATCCTAATGGAAATCTGAGTAGCTGGAATCGCGGAGACCCATGTAACTCTAACTGGACAGGAGTTTTGTGCTTCAATAGAACATTGACCGATGGCTATCTACATGTTCGAGAATTGCGACTACTAAATTTGAACTTGAATGGAACTTTAGCACCCGAGATTGGCAACTTATCTTATATGGAAATACTgAATTTCATGTGGAACAACGTTAGCGGGAGTATACCAAAGGAAATTGGCAATATCAAAAGTTTGGTACTCTTgCTCCTGAATGGAAATAAATTAACAGGTCAACTGCCAGAAGAGCTTGGTTATCTTCCAAAGTTGGACAGAATACAAATTGATCAGAATGAAATAACTGGACCTGTACCTACATCGTTTGCAAACCTGAACATGACAAAGCACTTTCACATGAACAATAATTCACTTACTGGGCCAATCCCACCAGAGCTTTCTCGCTTACCTAGCCTTGTTCACCTCCTTCTTGACAATAACAATTTATCAGGATATCTTCCGCCCGAGCTCTCCGAGATGCCAAAAATACGTATAATTCAACTTGATAACAATGACTTTAGTGGGAATACCGTTCCTGACTCTTATGGCAACATTTCAACATTATTGAAGTTGAGCCTAAGGAACTGCAACTTGCAAGGACCTATTCCTGATTTTAGCAGGATACCGAACCTTCTTTATATTGACCTCAGTTCTAATCAGTTGAGCGGACCGATTCCTTCTAATAAGCTTTCTGAAAAGATCACAACCATCGATTTGTCAAACAACAAGCTAAATGGAACTATTCCGTCCTACTTTTCTGGTCTTCCACGTCTTCAAAAATTATCACTTGCGAACAATTTCTTGAATGACAGTGTTCCTTCTGTCATTTGGCAGAACAAGACTTTAAATGGAACAGAAGCTTTGCTCCTGGAATTTCAGCATAATAATCTTACAGGCATATCAGGCAGCACTGATCTTCCTCCAAATGTCACACTCTGGCTTGAGGGAAATCCTCTATGTAACAATGGCACCCTTGCTCAGTTCTGTGGATCTGAAAGAGTCAATGACAGTAACATTGTGGATTCAACAAACTCAAGTGATAATTGTCCCAGTCAAGGATGTCCCCCGCCTTATGAATATTCAAAAAAATCTCCTGTGGAGTGCTTCTGTGCAGCCCCATTGCTTGTTGGTTATCGGTTGAAAAGTCCTGGATTTTTAGAGTTTGGCCCATACTTCAATACATTTGAGAATTACTTGAGTTCTGGTCTTAGTATATCTAATAGTCAGCTTGAAATTGATACCTTTATATGGCAAGAAGGACCTCGACTAAGAATGAACTTGAAACTTTTTCCTGTATCTGTTGATAACCAAAGCTCTCATACTTTCAATAGTAGTGAGGTTGTACGTATCGGTAGCTTGTTCACAGAATGGGATATTCCTGATGATGACTTGTTTGGACCTTATGAACTACTCAACTTCACTCTTCTGGATCCTTACAGGGATGTGATTGTCAGCTCTTCAAGTTCAGGAATAAGCACGGGAGCACTGGTCGGCATAGTCTTAGGGGCAATTGCCTGTGCAGTTACATTATCTGCAATAGTTACTCTTCTTATTCTGAGGATGCGCATGAGAAATTACCGTGTAATTTCAAAACGACATCATTCATCTAGAATCTCAATAAAAATTGATGGTGTGAGGAGCTTCACTTATGGAGAAATGGCTTTGGCTACAAACAATTTTAGTGACTCTTCTCAAGTTGGCCAAGGAGGGTATGGGAAGGTTTATAAAGGTATTCTTGCTGATGGTACTGTTGTTGCCATAAAACGTGCGCAGGAGGGATCATTGCAGGGTGAGAGGGAGTTCCTTACAGAAATACAATTACTATCAAGGTTACATCATCGCAACCTTGTGTCTTTGATTGGATATTGTGACGAAGAAGGTGAACAGATGCTGGTTTATGAATTTATGCCAAATGGAACACTACGGGATCTTCTTTCTGGTATGTCTACATTCTTAGCATCCAAGTTTGCTGTATTCATTGTTAGTTTCTTTAAGCTTTTGTCAACTGGTAAATCAAAAGAAGCTGCGAGTTTTGATATGAGATTGAGGATTGCGCTAGGGTCAGCCAAGGGTATTCTGTATCTACATACGGAAGCTGATCCTCCAATATTCCATCGAGATGTCAAGTCCAGCAACATATTATTGGGTTCTAGGAACTTGGCAAAAGTTGCTGATTTTGGACTTTCAAGGCTTGCTCCAGTTCCAGATATTGAAGGAATTGTGCCTGCTCATGTATCTACTGTGGTAAAGGGAACACCGGGTTATCTTGATCCAGAGTACTTCTTAACTCGTAAGTTGACTGACAAGAGTGATGTTTATAGCCTTGGTGTTGTATTTCTGGAACTTTTGACTGGGAGGCACCCAATCTCACATGGAAAAAATATTGTTAGAGAGGTTAAGGTTGCATACCAATCTGGTACAGTACACTCAGTCGTCGATACAAGCATGGGGTCCTATCCTTCTGAGTGCGTGGAGAGGTTCCTGAAACTGGCTCTAATGTGTTGCCAAGACGAGACAGATGCACGGCCTACAATGGCAGAAGTGGTTCGAGAGCTGGAAAATATATGTTCTATGATGCCTCAGTCGAATGCTAAGATACCTGAAGATATTTCCATTGATTCTGGAAAAATATTCAGTTCATCGTCTTCATCGTCTGCTATTCATACTCCATTTCCATTTATATCAGAAGAAGTGTCTGGTAGTAACCTTGATAGTGAAGTATCACCAACCATTAAGCCAAGATAG 3108 0.4035 MPSMFQIPLFLDDAYFVLWFHLLCGNWEALFRSKRFGLEVNNLIFFSCVYMGMGWGMYLSKCCWKYEVVFCLWLWCYLLLVAAKDPVTHPTEVGALKAIKGSLIDPNGNLSSWNRGDPCNSNWTGVLCFNRTLTDGYLHVRELRLLNLNLNGTLAPEIGNLSYMEILNFMWNNVSGSIPKEIGNIKSLVLLLLNGNKLTGQLPEELGYLPKLDRIQIDQNEITGPVPTSFANLNMTKHFHMNNNSLTGPIPPELSRLPSLVHLLLDNNNLSGYLPPELSEMPKIRIIQLDNNDFSGNTVPDSYGNISTLLKLSLRNCNLQGPIPDFSRIPNLLYIDLSSNQLSGPIPSNKLSEKITTIDLSNNKLNGTIPSYFSGLPRLQKLSLANNFLNDSVPSVIWQNKTLNGTEALLLEFQHNNLTGISGSTDLPPNVTLWLEGNPLCNNGTLAQFCGSERVNDSNIVDSTNSSDNCPSQGCPPPYEYSKKSPVECFCAAPLLVGYRLKSPGFLEFGPYFNTFENYLSSGLSISNSQLEIDTFIWQEGPRLRMNLKLFPVSVDNQSSHTFNSSEVVRIGSLFTEWDIPDDDLFGPYELLNFTLLDPYRDVIVSSSSSGISTGALVGIVLGAIACAVTLSAIVTLLILRMRMRNYRVISKRHHSSRISIKIDGVRSFTYGEMALATNNFSDSSQVGQGGYGKVYKGILADGTVVAIKRAQEGSLQGEREFLTEIQLLSRLHHRNLVSLIGYCDEEGEQMLVYEFMPNGTLRDLLSGMSTFLASKFAVFIVSFFKLLSTGKSKEAASFDMRLRIALGSAKGILYLHTEADPPIFHRDVKSSNILLGSRNLAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTRKLTDKSDVYSLGVVFLELLTGRHPISHGKNIVREVKVAYQSGTVHSVVDTSMGSYPSECVERFLKLALMCCQDETDARPTMAEVVRELENICSMMPQSNAKIPEDISIDSGKIFSSSSSSSAIHTPFPFISEEVSGSNLDSEVSPTIKPR 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2309 1035 SMART LRR_typ_2 376 400 IPR003591 -
Sto9g2309 1035 SMART LRR_typ_2 185 209 IPR003591 -
Sto9g2309 1035 SMART LRR_typ_2 257 281 IPR003591 -
Sto9g2309 1035 Gene3D Ribonuclease Inhibitor 281 349 IPR032675 -
Sto9g2309 1035 ProSitePatterns Protein kinases ATP-binding region signature. 687 709 IPR017441 GO:0005524
Sto9g2309 1035 ProSiteProfiles Protein kinase domain profile. 681 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2309 1035 Gene3D Transferase(Phosphotransferase) domain 1 757 996 - -
Sto9g2309 1035 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 69 1012 - -
Sto9g2309 1035 Gene3D Ribonuclease Inhibitor 209 280 IPR032675 -
Sto9g2309 1035 Gene3D Ribonuclease Inhibitor 91 208 IPR032675 -
Sto9g2309 1035 Pfam Leucine rich repeat 210 270 IPR001611 GO:0005515
Sto9g2309 1035 Pfam Leucine rich repeat N-terminal domain 90 128 IPR013210 -
Sto9g2309 1035 Gene3D Ribonuclease Inhibitor 350 474 IPR032675 -
Sto9g2309 1035 SMART serkin_6 681 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2309 1035 ProSitePatterns Serine/Threonine protein kinases active-site signature. 824 836 IPR008271 GO:0004672|GO:0006468
Sto9g2309 1035 SUPERFAMILY Protein kinase-like (PK-like) 666 1008 IPR011009 -
Sto9g2309 1035 CDD STKc_IRAK 687 976 - -
Sto9g2309 1035 Pfam Protein kinase domain 682 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2309 1035 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 69 1012 - -
Sto9g2309 1035 SUPERFAMILY L domain-like 102 460 - -
Sto9g2309 1035 Gene3D Phosphorylase Kinase; domain 1 651 756 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2309 Sto-Chr9 26447355 26458933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2309 76 987 Receptor kinase-like Gene Family AT5G01950 58.370 0.0 1011
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Sto9g2309 Pkinase 4.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2309 - - gmx:100786467 1328.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2309 9 26447355 26458933 Sto9g2309 9 26447355 26458933 ECH