Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2304 ATGGCTTATAGCAAACAACTCTCCATGAAGTTCCATTCTACTTCATTGCATCCTTTCCTTTTCTTCCTTGTTATTCTTTTTCCTCTGGCTATTGCTGACTTAAATTCAGATAAGCAAGCCCTTCTTAGTTTTGCTGCTGCTGTACCACATCGTCGGAACCTTAAGTGGAATGCAAACACTTCGGTCTGTACATCTTGGGTTGGTGTCTTTTGCAATCCAAATGGCACTCATGTTATTTCTCTTCGGCTCCCTGGAGTAGGACTAGTTGGCTCCATCCCTGCTGATACATTGGGAAAGCTAGACAACCTGAAAATTATTAGCTTTCGTTCTAACCTACTCAGTGGAAGTTTACCTGGTGATATtacttctcttccttctctgcAGTTTCTCTACCTCCAGCATAATAACTTTTCTGGTGATATACCTGCCTCATTTTCACGTCAGCTAAATGCACTTGATCTTTCATATAATTCCTTCACTGGTGTCATTCCGAAGACATTACAAAATTTAACAGAACTGACTAGATTGAACCTGCAGAACAACTCCCTTTCTGGAGAAATACCTAATCTCAATGCAACTAAGCTCAAGTATTTGAATTTAAGTTACAACCAATTGAATGGCTCTATTCCAGCAGCTCTTCAGACATTTCCTAATTCCTCCTTTGTAGGGAATTCTCTCTTATGTGGATCACCTCTAAAACCATGCTCTTCTGTCGCTCCTACACCTTCTCCTGCCATAACTCCAGCCCCACCATTAACTCCTACAAAAcaaaaatccaaaaataaaCTGAGTAAGGTGGCTATCATTGCAATTGCTGTTGGAGGAGCTGTGCTGCTGTTATTTGTAGCTCTTGTCATTCTTCTTTGCTGTTTAAAGaagaaagataatggaagatccaGTGTAATTAAAGGGAAGGGTCCTAGTGGTGGTAGGGCTGAAGTTCTGGGAAAGGGTAGTTATGGTACTGCATATAAGGCTGTATTGGAGGAGTCAACTACAGTTGTAGTGAAAAGGTTGAAAGAAGTAGTGGTAGGCAAGAGGGAGTTTGAACAGCAGATGGAGACTGTGGGAAGAGTTGGGCAGCACCCAAACGTTGTGCCACTCCGTGCTTATTATTATTCAAAGGATGAGAAGCTTTTGGTCTATGACTATATCCAAGGTGGCAACCTATCGACACTCTTGCATGGTAGTAGGGCAGGTGGAAGAGCTTCACTAGATTGGGACTCCCGATTAAAGATCTCATTAGGAACTGCCAGAGGAGTTGCCCACATGCACTCTGTTGGTGGTCCGAAATTCACTCATGGAAATATAAAGTCCTCAAATGTCCTCCTCAGCCAAGATAATGAAGGCTGCATTTCTGATTTTGGCTTGACGCCTCTTATGAATGTTCCAGCAACCCCATCTAGAGCCGCAGGTTATCGTGCTCCTGAGGTGATTGAAATTCGTAAGCACACTCACAAATCAGATGTATACAGTTTCGGTGTCCTCCTCCTGGAAATGCTTACTGGGAAAGCACCTCTGCAGTCACCAGGCCGTGATGATATGGTTGATCTCCCTAGATGGGTGCACTCTGTTGTCCGGGAGGAATGGACGGCCGAGGTTTTCGATGTGGAGTTAATGAGGTATCAAAACATCGAGGAGGAGATGGTTCAAATGTTGCAAATTGCCATGGCCTGTGTCGCGAAGGTGCCAGATATGCGACCTAGCATGGATGAAGTGGTGAGAATGATCGAAGAGATCCGGCAATCTGACTCAGAGAACCGGCCATCTTCTGAAGAGAATAAATCCAAGGATTCCAATGTTCAAACTCCATAA 1815 0.4259 MAYSKQLSMKFHSTSLHPFLFFLVILFPLAIADLNSDKQALLSFAAAVPHRRNLKWNANTSVCTSWVGVFCNPNGTHVISLRLPGVGLVGSIPADTLGKLDNLKIISFRSNLLSGSLPGDITSLPSLQFLYLQHNNFSGDIPASFSRQLNALDLSYNSFTGVIPKTLQNLTELTRLNLQNNSLSGEIPNLNATKLKYLNLSYNQLNGSIPAALQTFPNSSFVGNSLLCGSPLKPCSSVAPTPSPAITPAPPLTPTKQKSKNKLSKVAIIAIAVGGAVLLLFVALVILLCCLKKKDNGRSSVIKGKGPSGGRAEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKREFEQQMETVGRVGQHPNVVPLRAYYYSKDEKLLVYDYIQGGNLSTLLHGSRAGGRASLDWDSRLKISLGTARGVAHMHSVGGPKFTHGNIKSSNVLLSQDNEGCISDFGLTPLMNVPATPSRAAGYRAPEVIEIRKHTHKSDVYSFGVLLLEMLTGKAPLQSPGRDDMVDLPRWVHSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMACVAKVPDMRPSMDEVVRMIEEIRQSDSENRPSSEENKSKDSNVQTP 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2304 604 ProSitePatterns Protein kinases ATP-binding region signature. 315 346 IPR017441 GO:0005524
Sto9g2304 604 ProSiteProfiles Protein kinase domain profile. 309 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2304 604 CDD STKc_IRAK 315 580 - -
Sto9g2304 604 MobiDBLite consensus disorder prediction 578 595 - -
Sto9g2304 604 PANTHER LRR RECEPTOR-LIKE KINASE 7 313 - -
Sto9g2304 604 PANTHER LRR RECEPTOR-LIKE KINASE 312 604 - -
Sto9g2304 604 PANTHER OS05G0588300 PROTEIN 7 313 - -
Sto9g2304 604 PANTHER OS05G0588300 PROTEIN 312 604 - -
Sto9g2304 604 Pfam Leucine rich repeat N-terminal domain 35 72 IPR013210 -
Sto9g2304 604 MobiDBLite consensus disorder prediction 578 604 - -
Sto9g2304 604 SUPERFAMILY L domain-like 42 235 - -
Sto9g2304 604 Pfam Leucine Rich Repeat 194 215 IPR001611 GO:0005515
Sto9g2304 604 Pfam Protein kinase domain 313 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2304 604 SUPERFAMILY Protein kinase-like (PK-like) 313 578 IPR011009 -
Sto9g2304 604 Pfam Leucine rich repeat 147 183 IPR001611 GO:0005515
Sto9g2304 604 Pfam Leucine rich repeat 89 137 IPR001611 GO:0005515
Sto9g2304 604 Gene3D Phosphorylase Kinase; domain 1 310 384 - -
Sto9g2304 604 Gene3D Transferase(Phosphotransferase) domain 1 385 603 - -
Sto9g2304 604 Gene3D Ribonuclease Inhibitor 30 92 IPR032675 -
Sto9g2304 604 Gene3D Ribonuclease Inhibitor 93 240 IPR032675 -
Sto9g2304 604 ProSiteProfiles Leucine-rich repeat profile. 172 194 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2304 Sto-Chr9 26394439 26397085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2304 3 602 Receptor kinase-like Gene Family AT5G58300 64.375 0.0 799
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto9g2304 Pkinase 1.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2304 - - gmx:100796171 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2304 9 26394439 26397085 Sto9g2304 9 26394439 26397085 ECH