Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2287 ATGCAAGATCCACcttcaaaccctaatcccaatccCTCTCCTCACAATGCCAATGCAAATATTGCTTCCCAATTCCCGCCACCGCCGCCCGCCGTTTCCGCATCTCCGGCGACGCCCGCCGCCTcctcgtcgtcgtcgtcgttgtTTATCAGGGGAGGAGCTGCGGGTTCTGGCGTTGGCGGGTCCCACTCactccatcaccaccaccaccacaggAGGGCCCACTCCGAGGTTAGCTTCCGGTTGCCAGACGACATGATGGATCTGTCGCCGTCCGATCCGTTCAATGGAGGGTCGTCCACGGCCAGCCTTGAAGAGATCGGATCCGAGGACGACCTCTTCTCCACTTACATTGATGTTGACAAGCTCGGAGGGGCTAACGGATCCGGAGGTGGTGGCGGTGGGAATGGATCAGAtcagaatgggaatggaaatggtgTTGGAACAAGCAATCATAATGAAAGAGAGAAGAGTCCGAGTGCGAGGCCAAGACATAGGCATAGTAGCTCCGTAGATGGATCGAGTTCTACTAGCATGTTTGGAGAGATTATGGAGGCAAAGAAAGCTATGCCTCCTGATAAGTTAGCCGAGCTCTGGACGATTGATCCCAAGCGTGCCAAGAGAATTCTGGCCAATCGGCAATCTGCTGCTCGTTCAAAAGAGAGAAAGGCCCGTTATATCCAAGAGCTCGAGCGCAAAGTTCAGACCCTTCAGACTGAAGCCACAACTCTCTCTGCCCAACTGACGCTGTACCAGAGGGATACAACAGGTCTGAGCACAGAAAATACAGAGCTTAAGCTTCGTCTGCAAGCCATGGAGCAACAGGCACAGCTACGAGATGCTCTCAATGATGCATTGAAGAAGGAAGTTGAGAGACTTAAGGTTGCAACTGGGGAGATAATGAGCCCCTCTGAATCTTTTAATCTGGGAATGCACCATATGCAATTTACAGCTTCAAACTTCTTCCCATTTCCACCGCATTCAGGTCCTCCTGGTCATCAGAACATGCAGTTGCCATCATTTAATCACTCCCCATCTAGTATGCCAACTCATCAACTGCAACAAACAAATTCTCATCCGTACACAGAAATGTTGCACAATGACCAACTTGGTCGTTTGCAGGGGCTTGACATTAGTAGTAAAGCATCACCCCTTGTGAAGTCTGAAGGCCCCTCGCTTTCTGCAAGTGAGAGTAGCACAACATTTTAA 1209 0.4698 MQDPPSNPNPNPSPHNANANIASQFPPPPPAVSASPATPAASSSSSSLFIRGGAAGSGVGGSHSLHHHHHHRRAHSEVSFRLPDDMMDLSPSDPFNGGSSTASLEEIGSEDDLFSTYIDVDKLGGANGSGGGGGGNGSDQNGNGNGVGTSNHNEREKSPSARPRHRHSSSVDGSSSTSMFGEIMEAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDALNDALKKEVERLKVATGEIMSPSESFNLGMHHMQFTASNFFPFPPHSGPPGHQNMQLPSFNHSPSSMPTHQLQQTNSHPYTEMLHNDQLGRLQGLDISSKASPLVKSEGPSLSASESSTTF 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2287 402 Gene3D - 203 255 - -
Sto9g2287 402 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 202 265 IPR004827 GO:0003700|GO:0006355
Sto9g2287 402 SUPERFAMILY Leucine zipper domain 204 255 IPR046347 GO:0003700|GO:0006355
Sto9g2287 402 CDD bZIP_plant_RF2 205 254 IPR044759 GO:0003700|GO:0006355
Sto9g2287 402 MobiDBLite consensus disorder prediction 322 355 - -
Sto9g2287 402 MobiDBLite consensus disorder prediction 381 402 - -
Sto9g2287 402 PANTHER BZIP TRANSCRIPTION FACTOR 23 399 - -
Sto9g2287 402 MobiDBLite consensus disorder prediction 36 51 - -
Sto9g2287 402 MobiDBLite consensus disorder prediction 155 169 - -
Sto9g2287 402 MobiDBLite consensus disorder prediction 333 355 - -
Sto9g2287 402 SMART brlzneu 200 264 IPR004827 GO:0003700|GO:0006355
Sto9g2287 402 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 23 399 - -
Sto9g2287 402 MobiDBLite consensus disorder prediction 128 178 - -
Sto9g2287 402 MobiDBLite consensus disorder prediction 1 103 - -
Sto9g2287 402 Pfam bZIP transcription factor 204 259 IPR004827 GO:0003700|GO:0006355
Sto9g2287 402 Coils Coil 220 247 - -
Sto9g2287 402 MobiDBLite consensus disorder prediction 385 402 - -
Sto9g2287 402 MobiDBLite consensus disorder prediction 133 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2287 Sto-Chr9 26224713 26227278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2287 1 402 bZIP Transcription Factor Family AT2G40620 49.885 2.57e-106 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto9g2287 bZIP_1 6.9e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2287 - - gmx:100790732 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2287 9 26224713 26227278 Sto5g4401 5 52548244 52549714 CCT
Sto9g2287 9 26224713 26227278 Sto9g2287 9 26224713 26227278 ECH