Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2278 ATGGACGATGGTAAAGCAGGCTATGGTTATGTGGAAGCTGACCCAACTGGTCGCTTTGGCAGGTTTGGAGATATTCTAGGAAAAGGAGCAATGAAGATAGTATACAGAGCTATTGATGAGGTCCTTGGAATAGAGGTCGCGTGGAACCAAGTCAAACTCAACGAGGCACTTCGCACAGCCGAAGATTTGCAGCGTCTATACTCAGAGGTTCATCTCCTCAGTACCCTCAAGCATCAAAGCATCATACGATTCTATACCTCTTGGATTGATGTTGATAACAAGACCTTCAACTTTATAACAGAAATGTTCACTTCTGGGACACTAAGAGAATACAGAAAGAAATATACACAAGTTGGCATACAAGCTATAAAGAGTTGGGCCCGCCAAATCTTGCAGGGTCTTGTTTATCTACATGGAAATGATCCTCCGGTAATTCATAGAGACCTCAAATGTGATAATGTATTTATCAATGGCCATCTTGGACAAGTTAAAATTGGTGATCTAGGATTAGCAGCGATTCTCCGCGGTTCCCAGCCGGCCCACAGTGTTATAGGCACCCCAGAGTTCATGGCACCTGAACTATATGAAGAAGAGTACAATGAACTTGTTGATGTGTACTCATTTGGCATGTGTGTTTTGGAAATGCTTACATCTGAATACCCATATAGTGAATGTGCTAACCCTGCCCAGATCTACAAAAAAGTTACATCGGGGAAGTTGCCAGCCGCATTTTTTCGGCTTGAAGATACAGAAGCAAAGAGGTTTATTGGGAAGTGCTTGGTAACTGCATCAAAGAGGCCATCAGCAAAAGAATTATTGCTTGAACCATTTCTTGCTTCTGATGATGCCTTGTTAAATACCAAGTTTGATATTCAAAAACCATTTTTGAATGAAATAGAGATGGAAAAGTTACATTTGAATGATGATCTAATCAGGACTGAAATGAAAATCACAGGAAAGCTGAATCCTGAGGACGATACTATATTTCTCAAAGTCCAAATTGCTGATAAAAATGGTTCTGTAAGGAACATCTATTTTCCCTTTGACATTTTAACGGACACTCCCATTGATGTTGCAATGGAGATGGTGAGAGAGCTGGAGATCACTGATTGGGAGCCGTTTGAAATTTCAAATATGATTGAAGAAGAGATATCTGCACTGCTGCCACATAGGAGGAAAAGGGACCTTCCGGACGCCTTTCATATGTTCAGTTATCAAAACGACGACAATGACGGACCGCATCATCATTTCCGCTCGTTGTCTTCTTGTTCGTCATCCCAAGAATCTACATCAGGTTTAGTCACAAAAGCTGAGGAATTACCAAATGGATATTACTGGCTCCATGGCATGTTCCCTCTGTCCCTTAATTTTCCCTTTACTGCTATTTCATCAATGCATGCAATTAGAGGATTAATGCTTGACGATTTGCACGATGATTCGAGTTCGCGATGCTCATCTCAAGGGACATATTCCAACCTGAATTATATTTCTGTGGATGACCAGGAGAACAATGTGAATTCTACAAGAAAAGATAAACTACCCATCACCAAGAGTCACAAGTGTAAAATGTCTTCTTCCCCTTGTGAAGAACTAAGCTCTGGGTTATCTATATCTAGACTTTGTTGCAACCAGTGTAAAGCTTTAATGGGACCACaggctgcttcttcttcttcaagtaAAAATAAGAGGATGGACAATATTAGGTTGACAAGAAACAGGTCACTTATTGATGTACATAGCCAGATGCTACACCGATCCCTGGTCGAGGAGGTACATAAGAGACGCTTATTCAAGACAGTTGGAGCTGTGGAAAATATTGGATTTCAGACTCCTTTTGAGGTTTCCAGAAAAATCTCTCAACCAGTGTGTGGTGCTTTAGATTTGAAGCCTTCAAGGAGTGGCAAAGGAAAAGgacttaaaaactaa 1926 0.4024 MDDGKAGYGYVEADPTGRFGRFGDILGKGAMKIVYRAIDEVLGIEVAWNQVKLNEALRTAEDLQRLYSEVHLLSTLKHQSIIRFYTSWIDVDNKTFNFITEMFTSGTLREYRKKYTQVGIQAIKSWARQILQGLVYLHGNDPPVIHRDLKCDNVFINGHLGQVKIGDLGLAAILRGSQPAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEMLTSEYPYSECANPAQIYKKVTSGKLPAAFFRLEDTEAKRFIGKCLVTASKRPSAKELLLEPFLASDDALLNTKFDIQKPFLNEIEMEKLHLNDDLIRTEMKITGKLNPEDDTIFLKVQIADKNGSVRNIYFPFDILTDTPIDVAMEMVRELEITDWEPFEISNMIEEEISALLPHRRKRDLPDAFHMFSYQNDDNDGPHHHFRSLSSCSSSQESTSGLVTKAEELPNGYYWLHGMFPLSLNFPFTAISSMHAIRGLMLDDLHDDSSSRCSSQGTYSNLNYISVDDQENNVNSTRKDKLPITKSHKCKMSSSPCEELSSGLSISRLCCNQCKALMGPQAASSSSSKNKRMDNIRLTRNRSLIDVHSQMLHRSLVEEVHKRRLFKTVGAVENIGFQTPFEVSRKISQPVCGALDLKPSRSGKGKGLKN 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2278 641 Gene3D Transferase(Phosphotransferase) domain 1 103 286 - -
Sto9g2278 641 Pfam Protein kinase domain 24 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2278 641 CDD STKc_WNK 18 278 - -
Sto9g2278 641 SUPERFAMILY Protein kinase-like (PK-like) 22 315 IPR011009 -
Sto9g2278 641 Gene3D - 308 396 - -
Sto9g2278 641 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED 7 623 - -
Sto9g2278 641 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 7 623 - -
Sto9g2278 641 SMART serkin_6 20 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2278 641 ProSiteProfiles Protein kinase domain profile. 20 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2278 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Sto9g2278 641 Gene3D Phosphorylase Kinase; domain 1 6 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2278 Sto-Chr9 26173633 26176707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2278 10 617 MAP Kinase Kinase Kinase AT5G58350 57.120 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Sto9g2278 Pkinase 3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2278 K08867 - gmx:100272203 858.596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2278 9 26173633 26176707 Sto5g4397 5 52519180 52524017 CCT
Sto9g2278 9 26173633 26176707 Sto9g2278 9 26173633 26176707 ECH