Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2277 ATGGGTAATCACAGGTTCAGATTTTCAGATATGTTACCAAATGCTTGGTTTTACAAGCTCAAAGACATGAGCAGATCAAGGAAGCAGAGAAATTCTTCTCATGCTGTCAAGAAGAACAAAGCAAGCAGCTCATCACCAGCAATATCCCAAGTAACGCAGCCCAAGTGTTTGCATTATTTCCCAAATGAAACATACAGAGCTGGTAAGCTATTCAACTCACCAATTCACACAAAATTCACAGACTTTCCATTCACTGATTCTTCAAGAAGGTCATCCTCCAAGAGAAGGTTCAGGAGAAAAACCATTTACAAGCCTTCTCCTTCAGTTGCCTCTTCTGTCTCTGCCACTTCTTGCAGTTGCCATTGGACTACTAGGCCAAATCAAACTCGATCTCCGGATTACTATGCCTCTTCTTCCATGGAAAGTTCTTCTGATGAATTAGATCTCTATGAATGTCTTTCATCTGAGTCTGATGATGAGTGTGATGATAACTTTGTTGCACCTGAATTGTTCAATGGCCTATCCTCTGATTGCAGTTGCAGAGTGAGTTCTTCCACTAATGATATCATCATCGACATGAACCACGAATCATTCACTGGGAATCCTGAAAAGCTAGATGGGTTTGATCCAGTTTCACAGTTTGGTCTTGCTCCTATACTGACAAAGCCAGTGAGATTTGATGATAAGGTCATTGAAGCATCTAAATTGGAGGAAAGCAGTAGAAGTACTGTAGCTCGAAAATCTTCTGCTAGTTCTAGAGGTATAAGACTTAGAGTCAATTCTCCAAAACTTGCAAGCAGGAGAGTTCAAGCCTGTGCAAGAAGAAAGAgtgtatcatcatcatcatccagtGCATGCAAGGTTTCAAGGAACACAGGGCTTCCAGAGGGTTTTGCTGTTGTCAAGTCCTCAATTGATCCACAAAGAGACTTCAGGGAGTCAATGGTGGAGATGATCATGGAGAACAATATCTGGGAGTCAGAGGATTTGGAGGATCTGCTAGCCTGCTATCTCTCACTGAACTCAAGAGAATATCATCAACTCATTATCAAAGCATTTGAGCAAATTTGGTTTGACATGCCTCAACTCAGaatgtaa 1098 0.4044 MGNHRFRFSDMLPNAWFYKLKDMSRSRKQRNSSHAVKKNKASSSSPAISQVTQPKCLHYFPNETYRAGKLFNSPIHTKFTDFPFTDSSRRSSSKRRFRRKTIYKPSPSVASSVSATSCSCHWTTRPNQTRSPDYYASSSMESSSDELDLYECLSSESDDECDDNFVAPELFNGLSSDCSCRVSSSTNDIIIDMNHESFTGNPEKLDGFDPVSQFGLAPILTKPVRFDDKVIEASKLEESSRSTVARKSSASSRGIRLRVNSPKLASRRVQACARRKSVSSSSSSACKVSRNTGLPEGFAVVKSSIDPQRDFRESMVEMIMENNIWESEDLEDLLACYLSLNSREYHQLIIKAFEQIWFDMPQLRM 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2277 365 Pfam Transcriptional repressor, ovate 304 360 IPR006458 -
Sto9g2277 365 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 298 359 IPR006458 -
Sto9g2277 365 Pfam DNA-binding domain 1 42 IPR025830 GO:0003677
Sto9g2277 365 ProSiteProfiles OVATE domain profile. 300 359 IPR006458 -
Sto9g2277 365 MobiDBLite consensus disorder prediction 27 49 - -
Sto9g2277 365 PANTHER TRANSCRIPTION REPRESSOR OFP3 3 363 - -
Sto9g2277 365 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 363 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2277 Sto-Chr9 26169925 26171022 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Sto9g2277 Ovate 4.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2277 - - gmx:100780926 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2277 9 26169925 26171022 Sto5g4396 5 52515356 52516543 CCT
Sto9g2277 9 26169925 26171022 Sto9g2277 9 26169925 26171022 ECH