Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2274 ATGCCAGAGATCGGACGTGTTGAGAACAGCAACGCCTTGTTCGGCAAATATGAGCTGGGAAGGCTTCTGGGTTGTGGGGCCTTTGCGAAGGTCTACTTCGCCAGAAATGTTCAGAACGGCCAAAGCGTCGCCGTTAAGGTCATCAACAAGAAGAAGATCACCGGCTCCGGTCTCATGTCGAATATCAAGCGCGAGATTACCATCATGAGTCGCCTCCGTCACCCCAACATCGTTAAGCTCCATGAGGTCTTGGCCACAAAGACCAAGATCTACTTCGTCATGGAGTTCGTCAAGGGCGGCGAGTTGTTCTCAAAGATCTCCAAGGGACGCTTCAGCGAGGATCTCGCTCGCAAGTACTTCCAACAGCTGATCTCCGCCGTCGGGTACTGCCACTCCCACGGCGTGTTCCACCGCGACTTGAAACCGGAGAATCTCTTGGTCGACGAGAATGGGAATCTCAAGGTTTCGGACTTCGGACTCAGCGCCGTGAGGGAGCAGATCCGATCCGACGGGTTGCTCCACACGCTTTGCGGCACGCCGGCTTATGTAGCGCCGGAGATTTTAGCGAAGCAAGGCTACGATGGAGCGAAAGTGGATGTGTGGTCCTGCGGTGTCATCCTCTTCGTGTTGACGGCTGGATACCTTCCGTTCAATGACCCGAACCTCATGGTCATGTACAAGAAGATCTACAAAGGCGAATTCCGGTGCCCTAGGTGGATGTCGTCGGAGCTCCGGCGGTTCCTATCTAGGCTCCTGGACACCAACCCGGAGACCCGAATCACCATCGACGAGATCATCCGGGACCCGTGGTTCAGGAAAGGAAACAGGCAGATCAAATTTCACGAGGAGCACTTAGGTTCCACTTCAGGGACGAAGTTCGATGAGTCGGAGAAGATGACCGATCTGAATGCGTTTGATATCATCTCGTTCTCCTCCGGTTTGAACCTGTCCGGTTTGTTCGATGACTCGCACAACCCAGAGGAGGAAGGCGAGCGGTTCGTGTCGTCGAATTCGccggagaagataatggagagAGTGGAAGAGATAGCCAAGGCGGAGGGACTCGTcgtgaggaggaagaaggaatgTGGGGTGGAGCTGGAGGGGCAGAACGGTAATTTGGCGATTACCCTAGAAGTTTACCGGTTAACGGAAGGATTGGTACTGGTTGAGGCCACGAGAAAAGGCAGAGACGTTGCAGCTTTCAAGGATTTGTGGGACACCAAGGTAAGGCCTCAGCTCTGTGCTGCCGGTCATGAAGCTGAATCGCAGGTTGCCGAAAAAATTATGAACAAACTTTGGGAAGAATATAATGATATGAAGTAG 1326 0.5173 MPEIGRVENSNALFGKYELGRLLGCGAFAKVYFARNVQNGQSVAVKVINKKKITGSGLMSNIKREITIMSRLRHPNIVKLHEVLATKTKIYFVMEFVKGGELFSKISKGRFSEDLARKYFQQLISAVGYCHSHGVFHRDLKPENLLVDENGNLKVSDFGLSAVREQIRSDGLLHTLCGTPAYVAPEILAKQGYDGAKVDVWSCGVILFVLTAGYLPFNDPNLMVMYKKIYKGEFRCPRWMSSELRRFLSRLLDTNPETRITIDEIIRDPWFRKGNRQIKFHEEHLGSTSGTKFDESEKMTDLNAFDIISFSSGLNLSGLFDDSHNPEEEGERFVSSNSPEKIMERVEEIAKAEGLVVRRKKECGVELEGQNGNLAITLEVYRLTEGLVLVEATRKGRDVAAFKDLWDTKVRPQLCAAGHEAESQVAEKIMNKLWEEYNDMK 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2274 441 CDD CIPK_C 303 415 - -
Sto9g2274 441 Pfam Protein kinase domain 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2274 441 Gene3D Phosphorylase Kinase; domain 1 6 96 - -
Sto9g2274 441 SMART serkin_6 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2274 441 CDD STKc_SnRK3 16 270 - -
Sto9g2274 441 SUPERFAMILY Protein kinase-like (PK-like) 14 281 IPR011009 -
Sto9g2274 441 ProSiteProfiles Protein kinase domain profile. 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2274 441 Gene3D Transferase(Phosphotransferase) domain 1 97 278 - -
Sto9g2274 441 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 427 - -
Sto9g2274 441 PANTHER - 1 427 - -
Sto9g2274 441 Gene3D Kinase associated domain 1, KA1 298 417 - -
Sto9g2274 441 Pfam NAF domain 301 358 IPR004041 GO:0007165
Sto9g2274 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Sto9g2274 441 ProSiteProfiles NAF domain profile. 297 321 IPR018451 GO:0007165
Sto9g2274 441 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2274 Sto-Chr9 26140057 26141836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2274 1 426 CBL-interacting serine-threonine protein kinases AT2G30360 65.367 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sto9g2274 Pkinase 1.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2274 - - tcc:18591074 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2274 9 26140057 26141836 Sto5g4394 5 52499045 52502612 CCT
Sto9g2274 9 26140057 26141836 Sto9g2274 9 26140057 26141836 ECH