Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2254 ATGGCAAACCAGAAGATCATACCCTTCTCAGTTGAAACTAAGGATGTTGTGTTTGTTAAACCTTCAAAGCCAACACCTTCCACTGTTCTTTCTCTGTCTACTTTTGACAACAATCCTGAACTTAACATCCTTTGTCAAACAATCTATGTCTTCAAACCAAATCCTAATCATGGCCAACCAGAACCAGACCCTTCATGTGTGATCAAAGAGGCCCTCTCAAAGGTTTTGTTTTTCTATTACCCTCTTGCTGGGAAGCTCAAAAGCCACAGTGATGGAAAGCTTAGAGTCAACTGTGATGCTTCTGGGGTTCCATTCTTAGAGGCAACGGCTAACTGTGAACTCTCTTCTCTTCATTACGTTGATTTTGATGATGGGATTGACGTCATtgaaacaacaaaaaatttgatctttaattaTGCTTCTGAAGATGAAAACTCAGGTCACCATCCCTTGGTTTTACAAGTGACCAAGTTTCTCTGTGGGGGTTTCACCCTTGGAATGGGTTTGTCCCATTCTGTGTGTGATGGGTTTGGTGCGTCTCAGTTCTTCCGAGCCATGGCTGAACTTGCAAGTGGAAAAGACGAGCCATCTGTGAAACCtgtgtgggagagagaaagactAGTGGGAACCATTCTTAAGGAACCCATCAAATTCCCCTTTGAATTAACTTCCTCTGCCGCTTCACCATTTTGGCCAAGTTCACAACTTTCGTACCAGTTCTTCAACGTGAAGGGAGCCTACGTTTGGAGAGCAAGAGCCAGAGCTATGAAACTAAACTCTGAAGGGGAAACGTTGTTCTGTTTAACAATAGGAGCGAGACGAATTTTGGACCCACCTCTGCCTGATGGCTATTACGGAAATGCCTTCGTGGGAGCGAATCTGGTTCTAAAAGTGAAGGAACTGGAAGAGAGACCACTGTACGAGGTTGTGAAGCTCATAAAACAGAGCAAAAAGGCTGCTTTAAACAATGACTATATCAGAAACTCGATCAATATGATGGAGACGATGAGAGAGACGAATGTGGGGATTGGAAAGACAGGATCTTCAACGGTATTAACGGATTGGAGGCAGTTGGGGTTGCTGGAAGAAATGGATTTTGGGTGGAAGAGTCCGGTGAACATAGTGCCTTCACCGAGGAACATGTTTGGGTATGTGGATTTGTGTCTGTTCTTGCCTCCGAGTAATTTGGATGCTGAAATGAAAggtggggttagggtttatttgTCTCTTCCTGAAGCTGCTATGCCCATGTTTAGGGAGGAGATGGAGAAGCTAGAGCATATCGGTGAGGATGATGGTGGCATATAG 1308 0.422 MANQKIIPFSVETKDVVFVKPSKPTPSTVLSLSTFDNNPELNILCQTIYVFKPNPNHGQPEPDPSCVIKEALSKVLFFYYPLAGKLKSHSDGKLRVNCDASGVPFLEATANCELSSLHYVDFDDGIDVIETTKNLIFNYASEDENSGHHPLVLQVTKFLCGGFTLGMGLSHSVCDGFGASQFFRAMAELASGKDEPSVKPVWERERLVGTILKEPIKFPFELTSSAASPFWPSSQLSYQFFNVKGAYVWRARARAMKLNSEGETLFCLTIGARRILDPPLPDGYYGNAFVGANLVLKVKELEERPLYEVVKLIKQSKKAALNNDYIRNSINMMETMRETNVGIGKTGSSTVLTDWRQLGLLEEMDFGWKSPVNIVPSPRNMFGYVDLCLFLPPSNLDAEMKGGVRVYLSLPEAAMPMFREEMEKLEHIGEDDGGI 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2254 435 Pfam Transferase family 10 211 - -
Sto9g2254 435 Pfam Transferase family 241 424 - -
Sto9g2254 435 Gene3D - 220 422 IPR023213 -
Sto9g2254 435 Gene3D - 6 216 IPR023213 -
Sto9g2254 435 PANTHER ACYL TRANSFERASE 4 238 426 - -
Sto9g2254 435 PANTHER ACYL TRANSFERASE 4 6 245 - -
Sto9g2254 435 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 238 426 - -
Sto9g2254 435 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2254 Sto-Chr9 26001885 26003279 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2254 11 420 Monolignol Biosynthesis Gene Families AT5G48930 26.593 1.41e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2254 K20240 - gmx:100801843 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2254 9 26001885 26003279 Sto9g2254 9 26001885 26003279 ECH