Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2247 ATGGCATCTTCCTCTGGTAGTCTAGACACCTCCGCTAATTCCCATCCCAACTTCACTTTCTCCACGCACCCATTCATGACCACTTCCTTCTCTGAACTTCTCGCCGGCGACAACATCAACAATAACAACCACAACCACCATCCGGGCTCCGCCGCCATTGATAAGCCTCGCGGGTTGTCGGACCGCATAGCGGAGCGAACCGGGTCGGGTGTGCCCAAGTTCAAGTCGATTCCGCCTCCTTCTCTGCCTCTCTCTCCTCCGCCTATCTCTCCGTCTTCGTATTTTGCTATTCCGGCTGGGTTGAGTCCCGCTGAGCTTCTCGATTCTCCCGTTCTCCTCAATGCTTCTAACATTTTGCCATCTCCGACTACGGGAGCATTTTCTGCTCAGGCCTTCAATTGGAAGGCGGCCAGCTCAGGGCAAAACCAGCAGAATAtcaaagaagaagacaagaatAACTTCTCCACTTTCTCCTTCCAAACACAACCTAGGCCTCCTCTTCCACCCACCACAACGTTTCTATCTTCAGCTACCTCAAATCAAACTCAACAGTCATGGAGTTTTCAAGAAGCCACCACCAAGCAAGACAGTTATTCGTCAGGGAAGAGTATGGTGAAAGCTGAAAACGCATCTATGCAGAGCTATTCCAATGAGATTGCTAGTGTTCAAACCAACCATAACAGTGGGTTTCAATCGGATTATAGCAACAACTACCACCACCCACAAACTCAGACCTTAAGCAGAAGATCAGATGATGGGTACAACTGGAGGAAGTATGGGCAGAAGCAAGTGAAAGGAAGTGAGAACCCAAGAAGCTACTACAAATGCACATACCCAAGTTGTCCAACAAAGAAGAAGGTTGAGAGGTCTTTGGATGGCCAAATCACTGAGATAGTTTACAAGGGAACACATAACCATCCCAAGCCTCAGGCTACCAGGAGAAACTCATCATCATCTGCATCTTCTCTTTCTATTCCTGCTTCTAATCCTGCTGAAATCCCAGATCAAGCATTTGCTTCCCACGGTAATGGACAAATGGATTCGGTTGCAACACCTGAGAACTCATCCATATCCATGGGAGATGATGATTTTGAGCAGAGTTCCCAGAAGACTAGATCAGGAGGAGATGAGTTTGATGAAGATGAGCCTGATGCCAAAAGATGGAAAATAGAAGGTGAAAATGAGGGTATATCAGCACCTGGAAGCAGAACTGTGAGAGAACCCAGAGTTGTAGTCCAAACAACCAGCGACATAGATATTCTAGATGATGGCTATAGATGGAGGAAATACGGGCAGAAAGTAGTCAAGGGCAATCCAAATCCAAGGAGTTACTACAAATGCACACACCCAGGATGTCCAGTGAGGAAACATGTAGAGAGAGCCTCACATGACCTAAGGGCTGTGATCACAACGTACGAGGGAAAGCATAACCATGATGTTCCAGCAGCACGAGGGAGTGGGAGCCATTCTGTGAATAGACCTCTGCCAAACAATACCACAAACAGTGCACCCACAGCTATTAGGCCGTCGGCCATCACTCACAACACTAACAATTCCATAAACAATTCTCTTCAGAATTTTAGAGCACCACCTTCAGCACCAGAAGGGCAATCACCCTTCACCCTTGAGATGCTTCAAGATCCAGGAAGCTTTGGGTTCTCTGGGTTTGGGAATCCAATGGGGTCTTACatgaatcatcatcatcagcaacAGCAACAGCAGCAACAACAGACACAATCTGACAATGGGTTTTCTTCTAGAGCCAAGGAGGAACCCAGAGATGACATGTTTCTTGAATCTTTGCTATgctaa 1812 0.4619 MASSSGSLDTSANSHPNFTFSTHPFMTTSFSELLAGDNINNNNHNHHPGSAAIDKPRGLSDRIAERTGSGVPKFKSIPPPSLPLSPPPISPSSYFAIPAGLSPAELLDSPVLLNASNILPSPTTGAFSAQAFNWKAASSGQNQQNIKEEDKNNFSTFSFQTQPRPPLPPTTTFLSSATSNQTQQSWSFQEATTKQDSYSSGKSMVKAENASMQSYSNEIASVQTNHNSGFQSDYSNNYHHPQTQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPSCPTKKKVERSLDGQITEIVYKGTHNHPKPQATRRNSSSSASSLSIPASNPAEIPDQAFASHGNGQMDSVATPENSSISMGDDDFEQSSQKTRSGGDEFDEDEPDAKRWKIEGENEGISAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSVNRPLPNNTTNSAPTAIRPSAITHNTNNSINNSLQNFRAPPSAPEGQSPFTLEMLQDPGSFGFSGFGNPMGSYMNHHHQQQQQQQQQTQSDNGFSSRAKEEPRDDMFLESLLC 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2247 603 MobiDBLite consensus disorder prediction 477 603 - -
Sto9g2247 603 SMART WRKY_cls 250 308 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2247 603 SMART WRKY_cls 421 480 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2247 603 MobiDBLite consensus disorder prediction 226 250 - -
Sto9g2247 603 Gene3D WRKY domain 235 310 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g2247 603 MobiDBLite consensus disorder prediction 300 404 - -
Sto9g2247 603 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 57 571 IPR044810 GO:0003700
Sto9g2247 603 Pfam WRKY DNA -binding domain 251 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2247 603 Pfam WRKY DNA -binding domain 422 478 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2247 603 ProSiteProfiles WRKY domain profile. 416 481 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2247 603 MobiDBLite consensus disorder prediction 309 329 - -
Sto9g2247 603 MobiDBLite consensus disorder prediction 156 202 - -
Sto9g2247 603 SUPERFAMILY WRKY DNA-binding domain 413 481 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g2247 603 MobiDBLite consensus disorder prediction 341 364 - -
Sto9g2247 603 MobiDBLite consensus disorder prediction 226 254 - -
Sto9g2247 603 SUPERFAMILY WRKY DNA-binding domain 248 309 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g2247 603 MobiDBLite consensus disorder prediction 365 393 - -
Sto9g2247 603 MobiDBLite consensus disorder prediction 171 202 - -
Sto9g2247 603 ProSiteProfiles WRKY domain profile. 251 309 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2247 603 MobiDBLite consensus disorder prediction 490 532 - -
Sto9g2247 603 MobiDBLite consensus disorder prediction 563 585 - -
Sto9g2247 603 MobiDBLite consensus disorder prediction 37 57 - -
Sto9g2247 603 MobiDBLite consensus disorder prediction 260 279 - -
Sto9g2247 603 MobiDBLite consensus disorder prediction 1 21 - -
Sto9g2247 603 Gene3D WRKY domain 408 474 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g2247 603 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 57 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2247 Sto-Chr9 25942108 25944664 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2247 248 602 WRKY Transcription Factor Family AT2G38470 55.556 6.60e-112 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto9g2247 WRKY 1.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2247 K13424 - gmx:100127385 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2247 9 25942108 25944664 Sto9g2247 9 25942108 25944664 ECH