Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2243 ATGATGCTTATCCATATTGGGGTTGTGGAAATCCTAGTGCAGCCTTTGTTATGGAGAATTGTGGGATTTGCATCAAGTGTAGTTGGATTCCTCTGCTATGCTCTAAGCTCCTCTTTCACTCATCTATTTGGGGATTGGAACTTGCTCAAGATCATTATTTATAGCGCTCTAAGTTGTATCATTTGCAGCTTCTTGTTATATGCAAAGAAATGGAGTGTGTCAAAGAGTTTGGTGATGAAAGCTCAAATGGGATTTTTGGTATTGATGCTCATCTCCGTCTACTCCTTCTTTTACGACAAAGCCGTGAATGGATCAAAGCCAGATGTATTAAGCCTGGTTTCTTGTGGTGCCTTTGCTTTCATGTCATTTAGCCTCTCAAGGCTCACTGACCTTGGATTCGAAGTGGATCTGCTTAATTTTTTTCTGGGATGTTTGATCCTACTACTCATGAAGATCCATTTGATGTTAGGCTTGGTTGGAGCAGTTTTTGGTTATTCCCTCACACTATTTCGTTCCTCTTTGGATTCCCAAACTGAGATTGGAACTGCTACTATTATGGATCATGTAGTGTTAGATGTTGACTCTGCTGCAGATAACAACCGTGAATTccacaaaaaattatttgaagagACCTTCTCGAGGTTGCAGAAACTCAGCATCGAAGACGTTCACAAGATGCCATGGATGGACCTGAAGGAGGAAACTAAAAGATGGATTGAAGCTTCCAGAGTTTTCTTACATTCTTCCTCTGCTTCCGATCTCTCTTTCATAGAGGACCCCCGGGGATCGATGATTCAGCTTCTGAATTTCGCGGATGTCGTCGCGGAAGGGAGCATATCGCCGGAGCGTTTGTTCAGAATTCTAGACATGTTTGAGGTACTAAGGGACCTAATCCCGGCATTTGAATCCTTGTTCTCGGAGCAGGATTGTGTGTTCCTCAGAAACGAAGCAATCACAGTATGGAAGAGAGTAGGTAAAGCAATCACAGGCTTTTTCATGGAATTGGAAAATAGGATTCGTGAGGACCAGTCCAAGGCCGTTACGGGTGGTGTGGTTCATCCGGTTACCCGTTATGTGATGAACTACCTCCGTCTCGCCTGCGATTACCGGCAGACCCTAGAGCAAGTGTTTGAAGATAGAGTAGAATCATCTTCTTCACTATCCGGCCAAATGAGTAGGATTGTGGAGTTATTAGAGAGCAATTTAGAagccaaatccaaaacctaTAAGGACACTGCTTTGTGCTATGTTTTCATGATGAACAACGGGCGTTACATTGTCCACAAGGCAAAACAAGACAGTAGTGAGTTGGGAAGCCTATTGGGCCATGATTGGATCCAAACACAAATTGCAAAAGTGGGGCAATACCATGTGAACTATCAAAGAAGCTCATGGAATACGATTCTGAGCTTATTAGAACTAGACACTGGATCATCGGTTGCACCTAATGTTGCTGCAAAGACTATGAAACAAAATATCAAGTTGTTTAACAAGCAGTTTGAGGACATATGCAGGGTTCAATCTGCATGGGTCATCTTTGATGAGCAACTAAAGGAAGAGATGAGAATTTCTCTGGAAAAGATACTGTTGCCTGCTTATGCAGACTTCATTGGAAGGTTTCAGAATCTTCCAGAAGTGGGTAAGCATGCTGACAAGTATATTAGGCATGGACTGGAGGACATTGAAGCAAGACTTGGTGATTTGTTTCAGGGAAGCAGTGGACCCACTGGTGGCAGAAAGGATAACATGTGTGACAGAAAAGGTCAAATCATCGAATCCTGCTCCGCCAAACGCGAAGTTGACGCCGGTGAGGAGGTCGTGGTCGGAGAGGTTGGGGTGAAGGAAAGGAGGAAGGGTTTGCTTGAGCTTCAAGAAAGATGCAAGGAAGTCAGGAATTACTTTTCCATTGGAGAACCTACCATTGGCTACATGGCCTGGGAAATCCTTTCCATAAGGAAGAAAAGGGATGGGATGTCCAATAATTCTGAGTTCTTGAGGTTGTTGCTTGTCTTCACCATTGTGGTACCTGAAATTAGCATCAAACTGATCATGGAAATGATGAGATGCCTAGTTAGGGTATGCAGCCGATTGGAGGTAGCCCTACTACAGCTATCTTCCTGCATCCAAGGTCGTATAGTTCCTACAATTTTTTACAATAATGTCTTAAACTTGATGCTATGTGAATTGATAGAAGAACTGGAGATGACTCCAGAAGCAGCTGTGGTCAAATCATCAAATCCTGATCCACCAGAGGCAAAGCTGACTCCAGTTAGAAGCTCATGA 2283 0.4275 MMLIHIGVVEILVQPLLWRIVGFASSVVGFLCYALSSSFTHLFGDWNLLKIIIYSALSCIICSFLLYAKKWSVSKSLVMKAQMGFLVLMLISVYSFFYDKAVNGSKPDVLSLVSCGAFAFMSFSLSRLTDLGFEVDLLNFFLGCLILLLMKIHLMLGLVGAVFGYSLTLFRSSLDSQTEIGTATIMDHVVLDVDSAADNNREFHKKLFEETFSRLQKLSIEDVHKMPWMDLKEETKRWIEASRVFLHSSSASDLSFIEDPRGSMIQLLNFADVVAEGSISPERLFRILDMFEVLRDLIPAFESLFSEQDCVFLRNEAITVWKRVGKAITGFFMELENRIREDQSKAVTGGVVHPVTRYVMNYLRLACDYRQTLEQVFEDRVESSSSLSGQMSRIVELLESNLEAKSKTYKDTALCYVFMMNNGRYIVHKAKQDSSELGSLLGHDWIQTQIAKVGQYHVNYQRSSWNTILSLLELDTGSSVAPNVAAKTMKQNIKLFNKQFEDICRVQSAWVIFDEQLKEEMRISLEKILLPAYADFIGRFQNLPEVGKHADKYIRHGLEDIEARLGDLFQGSSGPTGGRKDNMCDRKGQIIESCSAKREVDAGEEVVVGEVGVKERRKGLLELQERCKEVRNYFSIGEPTIGYMAWEILSIRKKRDGMSNNSEFLRLLLVFTIVVPEISIKLIMEMMRCLVRVCSRLEVALLQLSSCIQGRIVPTIFYNNVLNLMLCELIEELEMTPEAAVVKSSNPDPPEAKLTPVRSS 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2243 760 Gene3D Exocyst complex component Exo70 194 576 - -
Sto9g2243 760 SUPERFAMILY Cullin repeat-like 205 569 IPR016159 -
Sto9g2243 760 Pfam Exo70 exocyst complex subunit 243 566 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sto9g2243 760 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 25 570 - -
Sto9g2243 760 PANTHER EXOCYST COMPLEX PROTEIN EXO70 25 570 IPR004140 GO:0000145|GO:0006887
Sto9g2243 760 MobiDBLite consensus disorder prediction 740 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2243 Sto-Chr9 25909250 25916084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2243 204 580 EXO70 exocyst subunit family AT5G58430 58.750 3.54e-152 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2243 K07195 - gmx:100803694 478.404