Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2242 ATGATGATGCTTATCAAGGTCCCAAAACTGCTTATCCATCCTTTGTTATGGAGAATTGTGGGATTTGCATCAAGCGTAATTGGATTACTCTGTTATGCCCTGAGCTCCTCTTTCATCCAATTATTTGGGAACTGGAACTTGCTCAAGATCATCCTCTATAGTGCCATTAGTTTCTCTATATGCACCATCATGTTGTTCGCAAACGCATGGAGACTCTCAAAGAATTTATTGGTGAAAGCTCACGTGGGATTTTTGGTATTCATGCTCATCTCTTTCTACTCCTTCTTCTACGACAAAGCCGTGAATGGATCAAACCCAGATGTACTAAGCCTCATCTCGTGTGCTTCCTTCGCTTTCATGTCATTCAGCCTCTCAAGGCAAACAGAGCTGGGATTCGAAGTGGATCTTCTTAACTTTTTCCTTGGAGTGCTTATCCTGCTTTTGATGAAGATTAATTTGATATTGGCTTTAGTTGGAGCGGGTTTTTCTTATTTCCTAGTGCTTCTTCGTTCCTCTTTGGATTCCCAATTGAAGAGTGGGACTAGTGCTAGTGCCACCCATCACTTAGCCATAGATATTGATTCTGTAAACCAGACAGAGTCATCACGAGACGATGGGTACGACTGGAGAAAATATGGAGAAAAATTAGTGCAAGGAAGTGGAAATCCAAGAAGTTACTACAAATGCACGTACCCCAATTGTTCATTGAAGAAAAAGGTTGAGACTTGTTTGGATGGGAAAATCAGGGAGATAATTTACAAGGGCAGCCATAACCATCCCAAGCCTCGCTCTACTACTGGAGATGAGTTTGATGGAGATGAAACTGATGCTACTACAAAATGGAAAATAGAAAGTGAAGATAAGGATATAACGGCACCTCGAAGTAGAAGAGTAAAAGAACCCAGAGTTGTAGTACACACACGATGTGAGGTAGACGTTCTAGCTGATGCGTACAGATGGAGGAAATACGGGCAGAAAGTTGTGAAGGGAAACCCAAATCCAAGAAGCATAAAAGTTGATGAGCAAAGTGAATGGGACTGGAACAAAATGGAGCCTTCTACTCATGAGCAAGCTAGTGGCTATGACCAGTTTCAAGAATTTCCAGCAGCTAATCATGATGAATCTGAAAATGAAGATGAGCATGCTGTTAGAGGTCTGCGAAAACTAGCCTGCTTCCTGGAAGCAGCTGTTGTAGTTGTGACAAGATCTTTCCTAGTTTTGAATTGTATAATTTGGCGTCAGAGTTTTGCTTCTCCACACACTTTGGCTGCTTTAAACTCAAAGTCATTTGCACAGCCTTTGGACATAAGTTCTACAATAATCTATCTGTTTGGACAAAGGGATAACCTTGGCCACAGAAAACGTCAGTTGTTATTGCCTGTGTCCACAAATGAATCTCCGAAGAAGAGAAGGGATGGGATGTCCAATTCTGAGTTGTTGAGGTTACTTGTGATCACCATTGTGGTAGCTGAGATGAGCACCATAGTGATGCACATCAAGAGCTATGGTGTTGGAAGTTGGGAAGGACATGATGTTCCAAATATTGAGCAAAGTATCGACAGAGGTCAGCGAAAACTAGCCTGCTTCCTGGAAGCACTTATTGTAGTTGAGGCAAGAGCTTTTCTAGTTTTGAATTGTATAATTTGGCATCTGAGTTTTGCTTCTCCACACACTTTGGCTGCTTTAAACTCAAACTCATTTGCACAGTTGTTGTTGCCTGTGTCCACAAATGAATCTCCGAAGAAGAGAAGGGATGGGATGTCCAATTCTGAGTTGTTAAGTTTGCTTGTGTTGACCATTGTGGTAGCTGAGATGAGAACCATAGTGATGCACATGAAAAGCCTACGTAAGACGACTCACCTCTGGCTTGGCACTTTCGACACGGCAGAAGAAGCTACCATGGCTTATGATGGCGAGGCTTTTAAGCTGAGAGGAGAGAATGCTAGGCTCAATTTTCCTCAGAAAGTGGTGATGGAGTCGGAAATTGGGTCGAGTGATTGA 2001 0.4238 MMMLIKVPKLLIHPLLWRIVGFASSVIGLLCYALSSSFIQLFGNWNLLKIILYSAISFSICTIMLFANAWRLSKNLLVKAHVGFLVFMLISFYSFFYDKAVNGSNPDVLSLISCASFAFMSFSLSRQTELGFEVDLLNFFLGVLILLLMKINLILALVGAGFSYFLVLLRSSLDSQLKSGTSASATHHLAIDIDSVNQTESSRDDGYDWRKYGEKLVQGSGNPRSYYKCTYPNCSLKKKVETCLDGKIREIIYKGSHNHPKPRSTTGDEFDGDETDATTKWKIESEDKDITAPRSRRVKEPRVVVHTRCEVDVLADAYRWRKYGQKVVKGNPNPRSIKVDEQSEWDWNKMEPSTHEQASGYDQFQEFPAANHDESENEDEHAVRGLRKLACFLEAAVVVVTRSFLVLNCIIWRQSFASPHTLAALNSKSFAQPLDISSTIIYLFGQRDNLGHRKRQLLLPVSTNESPKKRRDGMSNSELLRLLVITIVVAEMSTIVMHIKSYGVGSWEGHDVPNIEQSIDRGQRKLACFLEALIVVEARAFLVLNCIIWHLSFASPHTLAALNSNSFAQLLLPVSTNESPKKRRDGMSNSELLSLLVLTIVVAEMRTIVMHMKSLRKTTHLWLGTFDTAEEATMAYDGEAFKLRGENARLNFPQKVVMESEIGSSD 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2242 666 ProSiteProfiles WRKY domain profile. 198 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2242 666 SUPERFAMILY WRKY DNA-binding domain 201 262 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g2242 666 SMART WRKY_cls 314 357 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2242 666 SMART WRKY_cls 203 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2242 666 Gene3D AP2/ERF domain 602 655 IPR036955 GO:0003700|GO:0006355
Sto9g2242 666 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 181 266 IPR044810 GO:0003700
Sto9g2242 666 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 267 336 IPR044810 GO:0003700
Sto9g2242 666 MobiDBLite consensus disorder prediction 255 279 - -
Sto9g2242 666 SUPERFAMILY WRKY DNA-binding domain 306 336 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g2242 666 ProSiteProfiles AP2/ERF domain profile. 583 653 IPR001471 GO:0003700|GO:0006355
Sto9g2242 666 Pfam WRKY DNA -binding domain 204 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2242 666 Pfam WRKY DNA -binding domain 316 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2242 666 SMART rav1_2 601 659 IPR001471 GO:0003700|GO:0006355
Sto9g2242 666 Gene3D WRKY domain 301 357 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g2242 666 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 267 336 - -
Sto9g2242 666 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 181 266 - -
Sto9g2242 666 Gene3D WRKY domain 191 263 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g2242 666 SUPERFAMILY DNA-binding domain 614 654 IPR016177 GO:0003677
Sto9g2242 666 CDD AP2 609 653 IPR001471 GO:0003700|GO:0006355
Sto9g2242 666 ProSiteProfiles WRKY domain profile. 309 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2242 Sto-Chr9 25895809 25906929 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2242 192 336 WRKY Transcription Factor Family AT5G07100 55.215 5.18e-52 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto9g2242 WRKY 2e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2242 - K13424 ccaj:109792596 254.218