Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2239 ATGGAAAGTATCAAGGAGTTTGTTGGTGAAAGCTCAGTTCGGATTTTTGCCGTGAATGGAAAACCAGACTTGTTTAGCTTGATTTCATGTGCTTCCTTTGCTGCCATGTCATTGAGCTTGTCAAGGCAGACTGAGTTTGGATTCGAAGTGGATTTGCTCAATTTTTTCCTAGGATGTCTAACCCTACAATTGATGAAGATCAATTTGATGCTAGCTTTCATTGGAGCTGCTTTTTCTTATTCTCTCTTCCTTGTTCGTTCCTCTTTGGATTCCCAAGTGGAAATTGGGGACGCTAGAATCTCGGATCACGTAGCCCTGGATATTGATTCTGCAGATCACAGCCATCGATCACAGTCATTACACAGAAGGTCACCAGATGATGAAGACAAGAAGAACCACCAGCGAGTCTCTGGCATCATAGGTAAGCCTCGCGGGTTGACGGTTCGCATACCAGAGCGAACCGGGTCGGGCGTGCCCAAGTTTAAGTCGAGTCCACCTCCTTCTCCTTATTTGAATATCTCTCCTGGTTTGAGCCCATCTGATTTTCTTGATTCTCCGGTTTTTCTTTCTACAGTTCTCCATAATGCTTCTAAACAACAAGAATGGAGTACTCAAGAAAGCACCACCAAAGAAGACGGTTTTGCTTCAGGAAAGAGTGAAGAGAAGGCATCTATGCAAAGCGATTCTACGGAGATTGCTAAAGTTGAAAGCAACCGTAACAGTGGGTTTCAATTAAGCAGAATACCAAATGATGGGTACAATTGGAGAAAATATGGACGGAAGCAGGTGAAAGGAGATGAGAATTCAAGAAGCTTCTACAAATGCACATACCCCAATTGTCCAACAAAGAGGAAGATTGTGAGGTCTTTGGATGGGCAAATCACTGACATAGTTTACAGGGGAACACATATCCATCCCAAGCCAAATGTTACTAGGGGAAGCTCATCATCTGCATCTTCTCTTGGTCAATCCCTTTCTACCAGCGGTACTGGACCAATATTGGATTCGGATGTCACATTACAGAACTCATCTTTATCAACGGGAAATGATGATTTTAAGCAGAGTTTCCTTGAGACTAGATCAGGTGGAGATGAGTTTGATGAAGATGAACCTGATGCACAAATTCGGAAAATAGAAGTTTTAAATGTGGGTATACCCAGAGTTCTAGTCCAAACAACCAGCGACATAGATATTCTAGATGATGGGTATAGATGGATGAAATACGGGCAGAAAGTAGTCAAGGGCAATCCAAATCCAAGGAGTTACTACAAATGCACAAGCCCAGGATGTCTAATGAGGAAACATGTAGAGAGAGCCCCACATGACCCAAGGGTTGTGATCACAACATACGAGGGAAGGCATAACCATGATGTTCCTGCAGCCCGAGGGATTGGGAGGTATTCTGTGAATACACCTCTGCCAAGCAATAACACTAACAATTCTCTTCAGAGTTTTAAAGGGCAACCACCTTTCATCCTAGAGAGCTCATATTTATCAACGAAAGATGATTCTAGGAGGAGTTTCGAAAAGAATAAATCAGGAGGAGATGAGTGA 1554 0.4299 MESIKEFVGESSVRIFAVNGKPDLFSLISCASFAAMSLSLSRQTEFGFEVDLLNFFLGCLTLQLMKINLMLAFIGAAFSYSLFLVRSSLDSQVEIGDARISDHVALDIDSADHSHRSQSLHRRSPDDEDKKNHQRVSGIIGKPRGLTVRIPERTGSGVPKFKSSPPPSPYLNISPGLSPSDFLDSPVFLSTVLHNASKQQEWSTQESTTKEDGFASGKSEEKASMQSDSTEIAKVESNRNSGFQLSRIPNDGYNWRKYGRKQVKGDENSRSFYKCTYPNCPTKRKIVRSLDGQITDIVYRGTHIHPKPNVTRGSSSSASSLGQSLSTSGTGPILDSDVTLQNSSLSTGNDDFKQSFLETRSGGDEFDEDEPDAQIRKIEVLNVGIPRVLVQTTSDIDILDDGYRWMKYGQKVVKGNPNPRSYYKCTSPGCLMRKHVERAPHDPRVVITTYEGRHNHDVPAARGIGRYSVNTPLPSNNTNNSLQSFKGQPPFILESSYLSTKDDSRRSFEKNKSGGDE 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2239 517 MobiDBLite consensus disorder prediction 304 371 - -
Sto9g2239 517 SMART WRKY_cls 249 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2239 517 SMART WRKY_cls 399 458 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2239 517 MobiDBLite consensus disorder prediction 111 136 - -
Sto9g2239 517 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 198 485 - -
Sto9g2239 517 MobiDBLite consensus disorder prediction 198 212 - -
Sto9g2239 517 MobiDBLite consensus disorder prediction 495 517 - -
Sto9g2239 517 ProSiteProfiles WRKY domain profile. 244 308 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2239 517 MobiDBLite consensus disorder prediction 198 246 - -
Sto9g2239 517 Pfam WRKY DNA -binding domain 400 456 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2239 517 Pfam WRKY DNA -binding domain 250 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2239 517 Gene3D WRKY domain 235 309 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g2239 517 SUPERFAMILY WRKY DNA-binding domain 247 308 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g2239 517 MobiDBLite consensus disorder prediction 499 517 - -
Sto9g2239 517 ProSiteProfiles WRKY domain profile. 394 459 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2239 517 MobiDBLite consensus disorder prediction 220 246 - -
Sto9g2239 517 SUPERFAMILY WRKY DNA-binding domain 391 459 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g2239 517 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 198 485 IPR044810 GO:0003700
Sto9g2239 517 MobiDBLite consensus disorder prediction 308 356 - -
Sto9g2239 517 MobiDBLite consensus disorder prediction 111 175 - -
Sto9g2239 517 Gene3D WRKY domain 386 452 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2239 Sto-Chr9 25884863 25886811 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2239 251 470 WRKY Transcription Factor Family AT2G38470 54.331 2.68e-78 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto9g2239 WRKY 4.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2239 K13424 - gmx:100127385 365.155