Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2237 ATGGAGATTGGGGAAGCTAGTGCTAGAATCTCTGATCATGTAGCCGTGGATGTTGATTCATCTACCTCGAATCAAGCTCAACAGGAATTGAGTATTCAAGAAGGCACCACCAAACAAGACAGGTTTTCTTCAGGAAAGAGTGAAGTGAAAGACGAAATCGCATCTATGCAAAGCTATTCTGTGGAGATTGCTAATGTTCAAACCAACCACAACAGTGGGTTTCAATCTGAGAGCTTAAGCAGAGTACCAAATGATGGGTACAACTGGAGAAAATATGGACAGAAGCAAGCGAAAGGAAATGAGAATTCAATAAGCTACTACAAATGTACATACATCAATTGTCAAACAAAGAGGAAGATTGTGAGGTCTTTGGATGGGAAAATCATTGAGATAGTATACCGGGGAACACATAATCATCCCGAGCCTCAGGCTACCATGAGAAACTCATCATCTGCATCTAATCCTGTCACTGCTGAAATCCCAGATCATGCATTTGCTTCCCACGGTAATGGACAAATGGATTCGGTTGCAATATCTGAGAGCTCATCCATAACCATGGGAGATGATGATTTTGTGCAGAGTTCCCAGAAAAATAGATCAGGATTAGATGGGAAAGTAGAAGGTGAAAATGAGGGTATATCAGCACCTGGAAGCAGAACAGTGAGAGAACCCAGAGTTGTCGTCAAAACAACAAGCGACGTAGATTATCTAGATGATGGATATATATGGAGGAAATATGCCCAGAAAGTAGTCAAGGCCAATCCAATTCcaagGAGTTACTACAAATGCAGACACCCAGGATGTCCGGTGAGGAAGCAAGTAGAAATAGCCTCACATGACCCAAGGGCTGTTGTGATCACAACCTACGAGGGGAAGCATAACCATGATGCTCCTGCAGCCCAAGGCAGTGAGAGCCATTCTGTGAATAGACCTCTGCCAAACAAACACTCAGCCATCACACACAACACTAATAATTCCATAAACACTTCTCTTCAGAGTTTTAGAGCAGCAGAAGGGCAATCAACCTTCACCCTTGAGGACTCATCTTTATCAACTGGAGAAGAAGATTTTAGGAGAAGTTTTGAAAAGAGTAATAAATCAGGAGGAGATGAGTGA 1116 0.4238 MEIGEASARISDHVAVDVDSSTSNQAQQELSIQEGTTKQDRFSSGKSEVKDEIASMQSYSVEIANVQTNHNSGFQSESLSRVPNDGYNWRKYGQKQAKGNENSISYYKCTYINCQTKRKIVRSLDGKIIEIVYRGTHNHPEPQATMRNSSSASNPVTAEIPDHAFASHGNGQMDSVAISESSSITMGDDDFVQSSQKNRSGLDGKVEGENEGISAPGSRTVREPRVVVKTTSDVDYLDDGYIWRKYAQKVVKANPIPRSYYKCRHPGCPVRKQVEIASHDPRAVVITTYEGKHNHDAPAAQGSESHSVNRPLPNKHSAITHNTNNSINTSLQSFRAAEGQSTFTLEDSSLSTGEEDFRRSFEKSNKSGGDE 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2237 371 ProSiteProfiles WRKY domain profile. 78 142 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2237 371 MobiDBLite consensus disorder prediction 300 325 - -
Sto9g2237 371 SUPERFAMILY WRKY DNA-binding domain 81 142 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g2237 371 MobiDBLite consensus disorder prediction 192 217 - -
Sto9g2237 371 MobiDBLite consensus disorder prediction 338 371 - -
Sto9g2237 371 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 16 326 - -
Sto9g2237 371 MobiDBLite consensus disorder prediction 16 40 - -
Sto9g2237 371 SUPERFAMILY WRKY DNA-binding domain 229 298 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g2237 371 MobiDBLite consensus disorder prediction 294 325 - -
Sto9g2237 371 Pfam WRKY DNA -binding domain 84 140 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2237 371 Pfam WRKY DNA -binding domain 238 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2237 371 Gene3D WRKY domain 222 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g2237 371 Gene3D WRKY domain 68 143 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g2237 371 MobiDBLite consensus disorder prediction 351 371 - -
Sto9g2237 371 SMART WRKY_cls 83 141 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2237 371 SMART WRKY_cls 237 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2237 371 ProSiteProfiles WRKY domain profile. 232 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2237 371 MobiDBLite consensus disorder prediction 1 49 - -
Sto9g2237 371 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 16 326 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2237 Sto-Chr9 25871340 25872764 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2237 85 310 WRKY Transcription Factor Family AT2G38470 53.755 1.71e-74 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto9g2237 WRKY 1.9e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2237 K13424 - gmx:100127385 421.009