Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2236 ATGGTGAAAGCCGAGAACGCATCTACTGCTAGTGTTCAAACCAACCATAAAAGTGGGTACAACTGGAGAAAATATGGGCAGAAGCAAGTGAAAGGAAATGAGAACCCAAGAAGCTACTACAAATGCACATACCAAAGTTGTCCAACAAAGAAGAAGGTTGAGAGGCAAGCTGCATATAGAGAGGGACTGCAGATGAAGACTATATTGTAG 210 0.4238 MVKAENASTASVQTNHKSGYNWRKYGQKQVKGNENPRSYYKCTYQSCPTKKKVERQAAYREGLQMKTIL 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2236 69 SUPERFAMILY WRKY DNA-binding domain 14 57 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g2236 69 Pfam WRKY DNA -binding domain 19 58 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2236 69 ProSiteProfiles WRKY domain profile. 11 55 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2236 69 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 17 56 - -
Sto9g2236 69 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 17 56 IPR044810 GO:0003700
Sto9g2236 69 SMART WRKY_cls 16 62 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2236 69 Gene3D WRKY domain 5 66 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2236 Sto-Chr9 25868743 25869149 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2236 17 55 WRKY Transcription Factor Family AT2G38470 84.615 9.46e-20 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto9g2236 WRKY 1.2e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2236 K13424 - gmx:100127393 87.0409