Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2235 ATGCTTATGAGGCTTCCGGAATTGCTGATGCAGCCATTGATATGGAGAGTTGTGGGATTTACATCTAGTGTAGTTGGATTGATCTCTTATGCTCTGAGCTCCTCTTTCACTCATCTATTTGGGAAGTGGAACTTACTGAAGATCTTTATTTATAGTGTGGTAAGTTTCATAATCTGCATCTTCATGTTATTTGCTAAGAAATGGAAGGTATCAAGGAGTTTGTTGTTGAAGACTCATTTTGGATTTTTGGTATTAATGGTCACCTCTCTctactctttcttctatgataaAGCCGTGAATGGAAAACCAGACTCATATAGCTTGATTTCTTGTGCTGCTTTTGCTGCCATGTCATTGAGCTTGTCAAGGCAGACTGAGCTTGGATTCGAAGTGGATTTGCTCAATTTTTTCCTTGGATGTCTAACCCTACAATTGATGAAGATCAATTTGATGCTAGCTTTCATTGGAGCCGCTTTTTCCTATTGTCTAGTCTTTCTTCGTTCCTCTTTGGATTCCCAAATGGAGATTGGCGAAGCTAGTGCTACAATCTCCGATCATGTAATCCTAGATGTTGATTCTGCAAACCAAACCAATTACAGCAATCAAAGCCACCAATCACAGTCATTACACAGTGGAGAAGAATCGCCAGTGGAAGTAGAGTTGTCGTCACAGGCGATGTCGACGAAGACGAGTGGGCGAGGTCCAAGGCCAAGGAGCTCACAGTATAGAGGAGTTAGATTTTACAGAAGAACAGGTCGATGGGAGTCTCATATATGGGATTGTGGGAAACAAATATATCTGGGTGGATTTGACACAGCACATGCAGCTGCTCGtgCGTATGATAGAGCGGCTATTAAATTTCGGGGAGTAGACGCGGACACTAATTTCAACTTGGAAGATTATGAACAAGACTTGAAAcagATGAGTAATCTGACGAAGGAGGAGTTTGTTCACGTACTTCGCGGACAAAGCACTGGGTTTGCGGGAGGCAGCTCCAAATATGGAATTTTAGAAAAGAGAGCAGCAGTGATATTCACAAAGAGCTCGTGCTGCATGTGCCATAGTATAAAGCAGTTGTTGTATGAGCTAGGAGCCAGCCTAGCAGTGCATGAGCTTGATAGGGATATTGCGTTTGGGAGGGAAATGGAGTGGGCTTTAAGGGCTATGGGTTGTAACCCTGCTGTTCCTGCCATCTTCATTGGTGGCAAATTTGTGGGCTCTGCTAGAGATATCATGTCCCTTCATCTTGATGGCACCCTCAAGCAAATGCTCATTGATGCTAAGGCCATCTGGTTTTAg 1299 0.4249 MLMRLPELLMQPLIWRVVGFTSSVVGLISYALSSSFTHLFGKWNLLKIFIYSVVSFIICIFMLFAKKWKVSRSLLLKTHFGFLVLMVTSLYSFFYDKAVNGKPDSYSLISCAAFAAMSLSLSRQTELGFEVDLLNFFLGCLTLQLMKINLMLAFIGAAFSYCLVFLRSSLDSQMEIGEASATISDHVILDVDSANQTNYSNQSHQSQSLHSGEESPVEVELSSQAMSTKTSGRGPRPRSSQYRGVRFYRRTGRWESHIWDCGKQIYLGGFDTAHAAARAYDRAAIKFRGVDADTNFNLEDYEQDLKQMSNLTKEEFVHVLRGQSTGFAGGSSKYGILEKRAAVIFTKSSCCMCHSIKQLLYELGASLAVHELDRDIAFGREMEWALRAMGCNPAVPAIFIGGKFVGSARDIMSLHLDGTLKQMLIDAKAIWF 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2235 432 MobiDBLite consensus disorder prediction 198 237 - -
Sto9g2235 432 CDD AP2 240 296 IPR001471 GO:0003700|GO:0006355
Sto9g2235 432 ProSiteProfiles Glutaredoxin domain profile. 330 431 - -
Sto9g2235 432 CDD GRX_GRXh_1_2_like 341 423 - -
Sto9g2235 432 SUPERFAMILY DNA-binding domain 240 298 IPR016177 GO:0003677
Sto9g2235 432 Gene3D Glutaredoxin 334 430 - -
Sto9g2235 432 ProSiteProfiles AP2/ERF domain profile. 241 297 IPR001471 GO:0003700|GO:0006355
Sto9g2235 432 SUPERFAMILY Thioredoxin-like 336 431 IPR036249 -
Sto9g2235 432 TIGRFAM GlrX-like_plant: glutaredoxin-like family 338 431 IPR011905 -
Sto9g2235 432 Gene3D AP2/ERF domain 240 298 IPR036955 GO:0003700|GO:0006355
Sto9g2235 432 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 200 334 - -
Sto9g2235 432 Pfam Glutaredoxin 343 405 IPR002109 -
Sto9g2235 432 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 200 334 - -
Sto9g2235 432 SMART rav1_2 241 303 IPR001471 GO:0003700|GO:0006355
Sto9g2235 432 Pfam AP2 domain 241 289 IPR001471 GO:0003700|GO:0006355
Sto9g2235 432 MobiDBLite consensus disorder prediction 198 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2235 Sto-Chr9 25866754 25868480 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2235 241 334 AP2-EREBP Transcription Factor Family AT2G39250 71.277 3.85e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto9g2235 Glutaredoxin 3.5e-12 CL0172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2235 - - cam:101500062 253.832