Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2234 ATGATGCTTCCGAAATTGCTAATGCAACCATTATTATGGAGATGTGTGGGGTTTACATCAAGTGTAGTTGGAGTGCTCTGTTATGCTCTGAGCTCTTCTTTCACTCATCTATTCGGGAAGTGGAACTTGATGAAGATCCTTATTTATATTGTGGTAAGTTCCATAATCTGCATCTTCATGTTATTTGCTAAGAAATGGAAATTATCAAGGAGTTTGTTGGTGAAAGCTCAATTCGGTTTTTTGGTATTGATGCTTACCTCTCTATACTCTTTCTTCTACGACAAAGCCGTGAATGGAAAACCAGACTTACTTAACTTGATTTCCTGTGCTGCTTTCGCTGCCATGTCATTGAGCTTGTCAAGGCAGAGTGAGCTTGGATTCGAGGTGGATTTGCTTAATTTCTTCCTTGGATGTCTAACCCTACAATTGATGAAGATCAATTTGATGTTAGCTTTCGTTGGAGGGGCTTTTTCCTATTCTCTCATCGTTCTTCGTTCCTCTTTGGATTCCCAAATGGAGATTGGGGACGCCACAATCTCCGATCATGTAACCCTAAATATTGATTCTGCAAATCAAACAGATTACAGCGATCAAAGCCACCAATCACACTCATTACACAGAAGGTCGCTAGATGATGATTACAGTTCGAAGACCGACCCTGGGCAAAACCAGCAGATTATCAAAGAAGACGACAAGAATTTCTCGTTCCAACCCCAACCTAGGCCTCCTCTTCCACCCACCACAACGTTTCTATCTTCAGCCACCTCAAATCAAGCTCAACAGGCATGGAATTTTCAAGAAGCCACCACCAAGCAAGACAGTTTTTCTTCAGGAAAGAGTATGGTGAAACCCGAGAACGCATCTAGTGAGAACTATTCCAACGAGATTGGTACTGCTAGTGTTCAAACCAACCATAACAGTGGGTTTAAATCGGATTATAGCAACAACTACCACCACCCACAAACTCAGGCCTTAAGCAGAAGATCAGATGATGAGTACAACTGGAGAAAATATGGGCAGAAGCAAGTGAAAGGAAATGAGAACCCAAGAAGCTACTACAGATGCACATACCCAAGTTGTCCAACAAAGAAGATGGTTGAGAGGTCTTTGGATGGCCATATCACTGAGATAGTTTACAAGGGAACACATAACCATCCCAAGCCTCAGGCTACCAGGAGAAAATCATCATCTATATCTTCTCTTGCAATTTCTGCTTCTGATCCTGCCACCGCTGAAATCCCTCATCAATCCCTTTCTACTAGTGGACCAATATTGGATTCGGACGTCAAACTAGAGAACTCATCTTTATCAACCGGAGATGATGATTTTagCTTTCCTATTCTACATCCAACTCCATCCTATTGGAACAGCTTCATTGGCCACCACACACCTGCACCACCCGAGCCGCAACAGCTCCCGCGTCTTGCTGCCACACCAGATCTTGGACTTGAAACTTTCTATCATCCTGCGCAAAAGTGGCCAATGACAGGTAGAGTTGTCACCCTTTGGCAAGCTGCATATAGAGAGGGAGTGTAG 1536 0.4323 MMLPKLLMQPLLWRCVGFTSSVVGVLCYALSSSFTHLFGKWNLMKILIYIVVSSIICIFMLFAKKWKLSRSLLVKAQFGFLVLMLTSLYSFFYDKAVNGKPDLLNLISCAAFAAMSLSLSRQSELGFEVDLLNFFLGCLTLQLMKINLMLAFVGGAFSYSLIVLRSSLDSQMEIGDATISDHVTLNIDSANQTDYSDQSHQSHSLHRRSLDDDYSSKTDPGQNQQIIKEDDKNFSFQPQPRPPLPPTTTFLSSATSNQAQQAWNFQEATTKQDSFSSGKSMVKPENASSENYSNEIGTASVQTNHNSGFKSDYSNNYHHPQTQALSRRSDDEYNWRKYGQKQVKGNENPRSYYRCTYPSCPTKKMVERSLDGHITEIVYKGTHNHPKPQATRRKSSSISSLAISASDPATAEIPHQSLSTSGPILDSDVKLENSSLSTGDDDFSFPILHPTPSYWNSFIGHHTPAPPEPQQLPRLAATPDLGLETFYHPAQKWPMTGRVVTLWQAAYREGV 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2234 511 MobiDBLite consensus disorder prediction 391 425 - -
Sto9g2234 511 MobiDBLite consensus disorder prediction 200 215 - -
Sto9g2234 511 MobiDBLite consensus disorder prediction 380 425 - -
Sto9g2234 511 MobiDBLite consensus disorder prediction 193 329 - -
Sto9g2234 511 Pfam WRKY DNA -binding domain 330 386 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2234 511 SUPERFAMILY WRKY DNA-binding domain 328 388 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g2234 511 ProSiteProfiles WRKY domain profile. 324 388 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2234 511 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 225 444 - -
Sto9g2234 511 SMART WRKY_cls 329 387 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2234 511 MobiDBLite consensus disorder prediction 216 232 - -
Sto9g2234 511 MobiDBLite consensus disorder prediction 248 323 - -
Sto9g2234 511 Gene3D WRKY domain 314 389 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g2234 511 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 225 444 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2234 Sto-Chr9 25863047 25865334 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2234 330 424 WRKY Transcription Factor Family AT2G38470 41.739 4.24e-16 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto9g2234 WRKY 2.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2234 K13424 - gmx:100127393 273.092