Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2233 ATGTCTAATCCTACAATTGATGAAGATCAATTTGGTGCTAGCTTTTATCGGAGCCGCTTTTTCCTATTGTCTCATCCTTCTTCGTTCCACTTTGGATCCCCAAATGGAAGATGGGAGGCTCGAATGGGCCAATTCTTAGGCAAACCGTACGTTTATCTGGGTCTAGGTCTATTTGACACCGAGGTTGAAGCTGCAAGGGCTTATGACAAAGCAGCACTCAAATCCTACGGCAAAGATGCCATCACCAATTTTGATCCCAGCATCTATGAGAATGAGCTTAATTCtgAATCATCATCTGGTAATGCTGATCTCAATCTGGGGAATTCCAATTTAAATTCGCGGAACAATTGA 351 0.4245 MSNPTIDEDQFGASFYRSRFFLLSHPSSFHFGSPNGRWEARMGQFLGKPYVYLGLGLFDTEVEAARAYDKAALKSYGKDAITNFDPSIYENELNSESSSGNADLNLGNSNLNSRNN 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2233 116 CDD AP2 34 87 IPR001471 GO:0003700|GO:0006355
Sto9g2233 116 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 35 113 - -
Sto9g2233 116 Gene3D AP2/ERF domain 31 86 IPR036955 GO:0003700|GO:0006355
Sto9g2233 116 SMART rav1_2 34 91 IPR001471 GO:0003700|GO:0006355
Sto9g2233 116 ProSiteProfiles AP2/ERF domain profile. 15 85 IPR001471 GO:0003700|GO:0006355
Sto9g2233 116 SUPERFAMILY DNA-binding domain 34 87 IPR016177 GO:0003677
Sto9g2233 116 PANTHER FLORAL HOMEOTIC PROTEIN APETALA 2 35 113 - -
Sto9g2233 116 MobiDBLite consensus disorder prediction 92 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2233 Sto-Chr9 25860235 25860834 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2233 36 109 AP2-EREBP Transcription Factor Family AT4G36920 74.074 2.31e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2233 K09284 - ath:AT4G36920 97.0561