Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2230 ATGGCCTCTGCTCGCATCTCCCCTTCCGAGAAACTCACCATCAACATCACGATCGCCACTCTAGAAGCCTTCCTCACGCGCCTCTCCCGCCACGCCCACCGCGCGTGGGCCAATCGCCGCCCCTGGATCGAGCTCTTGGACCGGACCGCCATCTGCCGGCCAGAATCGCTCGCGGAAGCTGCCTCCCGAATTCGGAAGAACTTGTACTACTTCCGCGTCAACTACCTTATCGTACTCGCTCTGGTACTGGCGGTATCCCTCCTCTCCCACCCTCTGTCCCTTCTCCTCCTCGGCGCTCTGATCGGAGCCTGGCTGTTCCTCTACGTTCTCCGGCCGTCGGATCAGCAGCTTGTGATCTTCGGCCGTGCGTTCAGTGATTGCGAAGCTCTGATTGGGCTGAGTCTCGTCACCGTCGTCGTGATTCTTCTGACGAGTGTGGTGTCGCTGCTCGTCTCGACCTTCACAATGGGGTTGGTGATAGTTTGTGCCCACGGAGCATTTCGGGTTCCAGAAGATCTGTTTCTTGAGGAGCAAGGGCCATGGGCTTCTGGGCTTTTTGCCTTCGTTGGGAATAGTGGGCCCTGGGCCTCTCTGAGCTTGTCAAGACAGATTGACCTCGGATTTGAGGTTGATTTGTTCAATTTTTTCCTGGGTTTACTCATAGCTCAACTCATGATGTTCAACAAGTGGTTGGCTTTTGTCGGAGCACCTATCTGTTACTTTCTCATGCTTCTTCGTTCTTATCTGGATTCCAAGCCCCATACTGAGTCTGAGACTATCAGTATCAATGGCCACGTAACCGTACAAATTGATGCTTCAAACGAAGTTGAAGAAGAAGCTCAGAGTGACAGCGAGAATGGATTCTACACCATTCTGAGGGAAGACACAGTTCACTTTGCTCCTGACATTGAAGATAAACTTAAGAACACAGTAGATGCTGGGTTTGCCGAGGATTGCTGTCATGTCTTCATCAGTTGGCGAAGACAGATATTGGATAACAAGCTTTTGACAATCCGGTTAGAGAAGCTGAACCTCAATGAGATTGAAAACGTACCTCTCAACTTCCTCGAGAACAAGATCCAACGTTGGATTATGGCTTCCAACTACCTTATCAGGACACTATTGCCAAGTGAACGAAACCTCTGTAATCGTGTCTTCTCTGGATTCACTCCTTATGGGGATTTCTGTTTCACGGAGCTATGTAAAAGACCTGTGATTCAACTACTCAATTTCGCCGATGCAATCGCCGCCGGGAATGGCTCACCGGAGAGACTGTTCAGAATCCTCGGTCTGTTTGAGACTCTGAGAGACCTCTTACCGGGATTTGATTCTGTATTCTCCAATCAATACTCAGTGGTTCTCAGAAATAGGGCCTTTGATATTGAGAGAAGATTAAGGGAAGCAATCAAAGGAATTTTCATGGAGTTGGAGAATCTGACTCATCAAGAATCAGCAAAAGTGGTGCTTTCTAATGGTGGGCTTCATCCCCTAACCCACTATATAATGAACTACCTAGGTGTCGCTTGCAAATCATGGCGAACCCTTGAACGTGTTTTTAGAGGTGAGTCGTCATCGTCTTCTTCATTCTCTGTGCAGGTGAGTCAGATTATGGATTTGCTAAACAGTAGTTTAGAGAGAATCTCGAGGAAGTACAAGGACTCTGTTTTGTGCTCTGTTTTCATGATGAACAACCTGAGATACATTGTTCAGAAATCGAAACGCAGTGAAGTAGGGATGGTGTTGGGTGAAAAGTGGATCCAAAAACACGTGAGGAAGGTTCGGGAATACCTTGTGGAGTACAAGAGTAGGTCATGGAGTCACGTGGTTGGCATGTTGGGTGACACAATGAGACCAGATGCAGAGAAGATAATGAAGGTGTTTAGGTTGGAAATTGAGGGGATATGTGAGGCTCAATCGAAATGGGTTATGTTTGATGAGAAACTGAGTGAAAGGGTAAGAAGTTCATTGAAGAAAACATTGGTGTCCGCAtatgaagaaggagaaggcaCTTATATGAAGCAAGAAGATATTGTGGCTGCAATAGACAAGTTGTTTAAGGAAAGAGATGAGCTCAAAAACTGCAGAAATATTCAACCATCATGGACTCTAATCACACCCGCTGCTCAAGACTCGTATGAATGGAGTAAGCATGCTCAGGAAACAATCCTTAATTCTACAAGCCCTAGAAATCACTATTGGTGCATCCACAAGTTTAAGCAAGGTTGCCAAGCAAGCAAACAGGTGCAATTAATACAAGATAATCCTAAGATATACAAGACAAGGTACACCGGCTTCCATACCTGCAGATTTTGCAGAATTATTCCTGAGGCTCCAGAAATGCTCACAATAGCTGATAATGAGGAGTCATCTATTATTTGTCCTGAATCTTCAACCCATCCTCTCAAACAAGAATAG 2415 0.4617 MASARISPSEKLTINITIATLEAFLTRLSRHAHRAWANRRPWIELLDRTAICRPESLAEAASRIRKNLYYFRVNYLIVLALVLAVSLLSHPLSLLLLGALIGAWLFLYVLRPSDQQLVIFGRAFSDCEALIGLSLVTVVVILLTSVVSLLVSTFTMGLVIVCAHGAFRVPEDLFLEEQGPWASGLFAFVGNSGPWASLSLSRQIDLGFEVDLFNFFLGLLIAQLMMFNKWLAFVGAPICYFLMLLRSYLDSKPHTESETISINGHVTVQIDASNEVEEEAQSDSENGFYTILREDTVHFAPDIEDKLKNTVDAGFAEDCCHVFISWRRQILDNKLLTIRLEKLNLNEIENVPLNFLENKIQRWIMASNYLIRTLLPSERNLCNRVFSGFTPYGDFCFTELCKRPVIQLLNFADAIAAGNGSPERLFRILGLFETLRDLLPGFDSVFSNQYSVVLRNRAFDIERRLREAIKGIFMELENLTHQESAKVVLSNGGLHPLTHYIMNYLGVACKSWRTLERVFRGESSSSSSFSVQVSQIMDLLNSSLERISRKYKDSVLCSVFMMNNLRYIVQKSKRSEVGMVLGEKWIQKHVRKVREYLVEYKSRSWSHVVGMLGDTMRPDAEKIMKVFRLEIEGICEAQSKWVMFDEKLSERVRSSLKKTLVSAYEEGEGTYMKQEDIVAAIDKLFKERDELKNCRNIQPSWTLITPAAQDSYEWSKHAQETILNSTSPRNHYWCIHKFKQGCQASKQVQLIQDNPKIYKTRYTGFHTCRFCRIIPEAPEMLTIADNEESSIICPESSTHPLKQE 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2230 804 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 301 667 - -
Sto9g2230 804 Gene3D Exocyst complex component Exo70 246 693 - -
Sto9g2230 804 Pfam PRA1 family protein 36 177 IPR004895 -
Sto9g2230 804 SMART WRKY_cls 708 770 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2230 804 Gene3D WRKY domain 702 770 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g2230 804 ProSiteProfiles WRKY domain profile. 710 766 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2230 804 Pfam Exo70 exocyst complex subunit 361 667 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sto9g2230 804 SUPERFAMILY Cullin repeat-like 285 685 IPR016159 -
Sto9g2230 804 SUPERFAMILY WRKY DNA-binding domain 707 769 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g2230 804 PANTHER EXOCYST COMPLEX PROTEIN EXO70 301 667 IPR004140 GO:0000145|GO:0006887
Sto9g2230 804 Pfam WRKY DNA -binding domain 709 769 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2230 Sto-Chr9 25845464 25849235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2230 302 686 EXO70 exocyst subunit family AT5G58430 47.132 6.69e-112 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto9g2230 Exo70 1e-76 CL0295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2230 K07195 - aprc:113848528 510.375