Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2226 ATGGCCACGGACGTAAAGTCCGAATTCCAAAACCCCGATTTTCGACCCGCTCCGCAGCCGCCAGATTTCCATCCGGAACTCACCGAGTCACCTCACGATGGCCTCCATTTTTGGCAATTCATGGTCGCCGGTTCAGTCGCCGGATGCGTCGAGCACATGGCAATGTTCCCCGTTGACACCGTGAAGACCCACATGCAAGCTCTAGGATCATGCCCGATTAAGTCCGTTAGCGTTCGGCAAGCCCTTCAATCGATTTTGAAAACCGAGGGTCCGTCTGCACTATACCGGGGCATAGGCGCGATGGGTCTCGGTGCTGGACCAGCACACGCGGTGTATTTTTCGGTTTATGAGATGTGTAAGAAGTATTTCTCTCATGGGGATCCCAAGAATTCCACTGCCCATGCGATATCTGGCGTTTGTGCTACTGTTACGAGTGATGCTGTGTTAACGCCGATGGATATGGTGAAGCAGAGATTGCAATTGAGTAATAGTGGTTACAAGGGTGTTGGGGACTGTGTAAAGAGGGTTTTCAGTGAGGAAGGGTTAGGAGCGTTTTATGCATCTTATAGGACTACGGTTTTGATGAATGCACCATATACAGCAGTGCATTTTGCAACATATGAGGCTGCAAAAAGAGGCCTTATGGAAATTTCGCCACAGAGTGCTGATGATGAACGTTTGCTTGTTCATGCAACTGCTGGAGCTGCTGCTGGTGCTTTGGCTGCAGCTGTTACAACACCGCTTGATGTGGTTAAAACTCAGTTGCAGTGTCAGGGAGTTTGTGGATGTGATAGATTTAAAAGTGGTTCAATTGGGGATGTCATTAAAACAATAGTGAAAAAGGATGGATACAGAGGGCTCATGCGAGGATGGATTCCAAGGATGCTCTTCCATGCTCCTGCAGCTGCAATCTGCTGGTCCACATATGAAGCTGGAAAGACCTTTTTCCAAGGATTCAATCAAAGACAAGACAGTCATACTGTGAACTAA 990 0.4828 MATDVKSEFQNPDFRPAPQPPDFHPELTESPHDGLHFWQFMVAGSVAGCVEHMAMFPVDTVKTHMQALGSCPIKSVSVRQALQSILKTEGPSALYRGIGAMGLGAGPAHAVYFSVYEMCKKYFSHGDPKNSTAHAISGVCATVTSDAVLTPMDMVKQRLQLSNSGYKGVGDCVKRVFSEEGLGAFYASYRTTVLMNAPYTAVHFATYEAAKRGLMEISPQSADDERLLVHATAGAAAGALAAAVTTPLDVVKTQLQCQGVCGCDRFKSGSIGDVIKTIVKKDGYRGLMRGWIPRMLFHAPAAAICWSTYEAGKTFFQGFNQRQDSHTVN 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2226 329 PRINTS Mitochondrial carrier protein signature 40 53 IPR002067 GO:0055085
Sto9g2226 329 PRINTS Mitochondrial carrier protein signature 53 67 IPR002067 GO:0055085
Sto9g2226 329 PRINTS Mitochondrial carrier protein signature 144 162 IPR002067 GO:0055085
Sto9g2226 329 PRINTS Mitochondrial carrier protein signature 186 204 IPR002067 GO:0055085
Sto9g2226 329 PRINTS Mitochondrial carrier protein signature 234 256 IPR002067 GO:0055085
Sto9g2226 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 35 122 IPR018108 -
Sto9g2226 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 129 213 IPR018108 -
Sto9g2226 329 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 1 324 - -
Sto9g2226 329 Gene3D Mitochondrial carrier domain 130 329 IPR023395 -
Sto9g2226 329 Pfam Mitochondrial carrier protein 130 216 IPR018108 -
Sto9g2226 329 Pfam Mitochondrial carrier protein 226 317 IPR018108 -
Sto9g2226 329 Pfam Mitochondrial carrier protein 35 125 IPR018108 -
Sto9g2226 329 PANTHER MITOFERRIN-1-RELATED 1 324 - -
Sto9g2226 329 MobiDBLite consensus disorder prediction 1 28 - -
Sto9g2226 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 315 IPR018108 -
Sto9g2226 329 SUPERFAMILY Mitochondrial carrier 33 310 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2226 Sto-Chr9 25801410 25803129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2226 1 327 Chloroplast and Mitochondria Gene Families AT1G07030 73.939 3.38e-172 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2226 K15113 - gmx:100802640 561.607