Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2215 ATGCAAAGAGATAGAACAGAAAAAGAagcagaaaaagagagagagaaagatatgAGACTGAATTCATTGCTTCGAAGCCCAAAGAAAGAGGAGCAACAAGTACCCGATGCCATCTTCTCCAAATTATCCGATGATTCCAATAATGAAGACTTGGATACTATTCTGGATGAACTGAACGACGCCGTTTTGGGCACCAAACACAGTCACGACGACGCACAATTACCCCTCCTCAACTGGGATTTCATGGAATGGGAGAGAGACGGATTAACGTCATCCGCCATTGATACAGAGGAAGCAGAActagaagaggaggaagaagatgatgaagacaAAAAGCCGGATGAGGATGACGATGTTGGGAAGACGACGATGATGATAAAGAGAGAAATTGTTGGGTTTTGGGAAGATGATGAGAAGAACAAGAGTATTGTGTCTTTGAATTTGAACTTGAATTATCAAGAAGTTTTGGACGCATGGTCTGACCGTGGCTCTCTCTGGGCTGAGGATTATTCTCTTTCAAATTCAATGCCTTCCAACAGTAGTGGCTACTACTATATGGGAGAGGTTCCAATATTGGAGGAGGAGAGAACGAGGAGGGAGGCGAGTGTTCTAAGGTACAAAGAGAAGCGGCAGAGCAGATTGTTCTCCAAGAAGATAAGATACCAAGTTCGCAAACTCAATGCTGATAAAAGACCCAGAATCAAGGGTCGCTTTGTCAAGAGACTTTAG 729 0.4019 MQRDRTEKEAEKEREKDMRLNSLLRSPKKEEQQVPDAIFSKLSDDSNNEDLDTILDELNDAVLGTKHSHDDAQLPLLNWDFMEWERDGLTSSAIDTEEAELEEEEEDDEDKKPDEDDDVGKTTMMIKREIVGFWEDDEKNKSIVSLNLNLNYQEVLDAWSDRGSLWAEDYSLSNSMPSNSSGYYYMGEVPILEEERTRREASVLRYKEKRQSRLFSKKIRYQVRKLNADKRPRIKGRFVKRL 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2215 242 MobiDBLite consensus disorder prediction 92 119 - -
Sto9g2215 242 MobiDBLite consensus disorder prediction 1 35 - -
Sto9g2215 242 PANTHER CCT MOTIF FAMILY PROTEIN 19 241 - -
Sto9g2215 242 MobiDBLite consensus disorder prediction 1 49 - -
Sto9g2215 242 Pfam CCT motif 199 241 IPR010402 GO:0005515
Sto9g2215 242 ProSiteProfiles CCT domain profile. 199 241 IPR010402 GO:0005515
Sto9g2215 242 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 19 241 - -
Sto9g2215 242 MobiDBLite consensus disorder prediction 96 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2215 Sto-Chr9 25754082 25755085 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2215 144 241 C2C2-CO-like Transcription Factor Family AT1G73870 46.903 4.12e-22 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto9g2215 CCT 9.1e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2215 - - zju:107411546 225.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2215 9 25754082 25755085 Sto9g2215 9 25754082 25755085 ECH