Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2209 ATGGTGACTGGTGGAAGGAACAGAGGAAGAGTTGGGATCATCAAGAGGAGGGAGAAGCATATGGGCACTTTCGACACCATTCATGTCCAACATGCTGTTGGGAATGAGTTTGGAACTCGTCTGGAAAACGTGTTCATTATTGGGCAGGGCTCAAAGCCATGGATTGGGCAATTCAATATGGTGAAGAGAAGTGATTTTACCTTGTGTAGATTGAGAAGTTTCTCATTGTTCAGCTTTTCCAAGGACAATGCAAGTTCCATTGCTGCATAA 270 0.4407 MVTGGRNRGRVGIIKRREKHMGTFDTIHVQHAVGNEFGTRLENVFIIGQGSKPWIGQFNMVKRSDFTLCRLRSFSLFSFSKDNASSIAA 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2209 89 CDD KOW_RPS4 1 48 IPR041982 -
Sto9g2209 89 PANTHER 30S/40S RIBOSOMAL PROTEIN S4 1 55 IPR000876 GO:0003735|GO:0005840|GO:0006412
Sto9g2209 89 Pfam 40S ribosomal protein S4 C-terminus 32 55 IPR032277 -
Sto9g2209 89 Gene3D - 1 62 IPR014722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2209 Sto-Chr9 25724511 25725629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2209 1 55 Cytoplasmic Ribosomal Protein Gene Family AT5G07090 69.091 1.90e-24 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2209 K02987 - egr:104425650 97.0561