Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2204 ATGCAGAAGAAATTGCAGAAGCTCAGTCGGAACGTATCCGAAGCAATAGCCTCGCTAAAGAACTCTCTCAATCTGGATTCTACTCGCGACCCATCTTCCAAGATGGATAATAATAGTTCTCAGAAAGTTATTTGGGGAAGTGTCGTACGGAATCTCACTCAGCTCTATCCTGGTAGCCAGCTTCCGGAGAAGCTCATGTCTAACATACGCAGGCATTACGATTCGTTGCCTCTCAGTTATGCTCAGGCGGAATTTGATATGAAGGATGTATTTCTTCACATCAAGTTGATAGAGCAAGTATCAGCAGATGACCAGCCTGCAATTTTAATTCAAGAAGAGTCTGACAATGAAATTCAGGGGACTGTGTTCAAGCTGACATTTGCTTGTAACTCTCCAATTTCATGGCCGGCAATGTCCAGTGCACTGGACGGTTCGTCTATCTGCTGCAAGAAGATACAGATCTTTGAGAAGAAAGGTTTCACCCTCGGGattgttcttcttcttgttcattCTGGGCATGACAGATTGGTCAGAACCCGGGTTGAAAGTGCCCTGAAATTTGCCATGAAAAAACCCAAAACTAGTGCAGTGAAGCTCCCTTTTGGGCTCTGTGGATGTCAAGAAGAGAGCTCCAAGAGGAGAGAACTTGGGGAAATTGAAGAAGACGCTGGTGATTCATATTATGGAAACGGGTTTGAGAATTCGAGCCAAAGGGTGCAGCTTCAGATGCCTTTACCCTCTTCATCTTTTCTTGTATCCATAGATGAATGGCAGACGATTCAGGCAGGTGGAAATGAGATTGAAAAATGGTTATTGAGCTCAGATAGTCTTGATTTTGTAGAACAGGTTGGACCCAATTCATTTAAGGGGGTGTACATGGGGAAAAAGGTTGGGATCGAGAAGCTTAAAGGGTGTGACAAAGGAAATTCTTATGAGTTTGAGCTTCGTAGAGATCTGCTGGAACTGATGACTTGTGGTCACAAAAACATTCTGCAATTCTGTGGTGTTTGCATAGATGAGAATCACGGGTTATGCGTGGTGACAAAGTTCATGGAAGGTGGATCAGTACATGATTTAATGCTAAAGAACAAGAAGCTTCAGACTAAGGAAATTATAAGAATAGCAGTGGATGTAGCTGAAGGGATCAAATTTATGAATGATCACGGTGTTGCATATAGAGACCTTAATACACAGAGGGTTCTATTGGATCGACATGGGAATGCTTGCCTGGGGGATATGGGTATAGTCACTGCGTGCAAGAATGTTGGAGAGGCTATGGAGTATGAGACTGATGGTTATCGGTGGCTAGCTCCAGAGATAATTGCAGGTGACCCAGAGAGCGTGACAGAGACATGGATGAGTAACGTTTACAGTTTTGGGATGGTGATATGGGAGATGGTTACCGGTGAGGCAGCCTTTTCTGCATATTCACCTGTTCAAGCAGCAGTGGGCATTGCTGCTTGTGGCCTTAGACCTGAGATCCCCAAGGACTGCCCTCAAACTCTAAAGTCTCTCATGACCAAGTGCTGGAACAACACCCCTTCAAAACGCCCTCACTTCTCTGAAATTCTATCCTTATTGCTGCGACCAAACAAACAATAG 1602 0.4395 MQKKLQKLSRNVSEAIASLKNSLNLDSTRDPSSKMDNNSSQKVIWGSVVRNLTQLYPGSQLPEKLMSNIRRHYDSLPLSYAQAEFDMKDVFLHIKLIEQVSADDQPAILIQEESDNEIQGTVFKLTFACNSPISWPAMSSALDGSSICCKKIQIFEKKGFTLGIVLLLVHSGHDRLVRTRVESALKFAMKKPKTSAVKLPFGLCGCQEESSKRRELGEIEEDAGDSYYGNGFENSSQRVQLQMPLPSSSFLVSIDEWQTIQAGGNEIEKWLLSSDSLDFVEQVGPNSFKGVYMGKKVGIEKLKGCDKGNSYEFELRRDLLELMTCGHKNILQFCGVCIDENHGLCVVTKFMEGGSVHDLMLKNKKLQTKEIIRIAVDVAEGIKFMNDHGVAYRDLNTQRVLLDRHGNACLGDMGIVTACKNVGEAMEYETDGYRWLAPEIIAGDPESVTETWMSNVYSFGMVIWEMVTGEAAFSAYSPVQAAVGIAACGLRPEIPKDCPQTLKSLMTKCWNNTPSKRPHFSEILSLLLRPNKQ 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2204 533 Pfam Protein tyrosine and serine/threonine kinase 312 526 IPR001245 GO:0004672|GO:0006468
Sto9g2204 533 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 531 - -
Sto9g2204 533 PANTHER SERINE-THREONINE PROTEIN KINASE 1 531 - -
Sto9g2204 533 Gene3D Transferase(Phosphotransferase) domain 1 271 530 - -
Sto9g2204 533 PRINTS Tyrosine kinase catalytic domain signature 348 361 IPR001245 GO:0004672|GO:0006468
Sto9g2204 533 PRINTS Tyrosine kinase catalytic domain signature 384 402 IPR001245 GO:0004672|GO:0006468
Sto9g2204 533 PRINTS Tyrosine kinase catalytic domain signature 454 476 IPR001245 GO:0004672|GO:0006468
Sto9g2204 533 PRINTS Tyrosine kinase catalytic domain signature 498 520 IPR001245 GO:0004672|GO:0006468
Sto9g2204 533 SUPERFAMILY Protein kinase-like (PK-like) 255 527 IPR011009 -
Sto9g2204 533 ProSiteProfiles Protein kinase domain profile. 277 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2204 Sto-Chr9 25681299 25685368 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2204 260 527 MAP Kinase Kinase Kinase AT2G17700 33.818 9.75e-52 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Sto9g2204 PK_Tyr_Ser-Thr 2.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2204 - - pvu:PHAVU_008G258400g 933.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2204 9 25681299 25685368 Sto9g2204 9 25681299 25685368 ECH