Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2202 ATGAGGCATAATGTGGCCGCTATAATTGCACATCAAGCAAAGTTTAACTCCGGGAACAAGGGAAAGGgagttaccaatccagtgttCAACAATGCGGGAGGACCCCCACAACCCTCCACCCCCTCCTGCCGCAAAGCCTCCATATTCCACCGCGTCCGAGCCGCCAACTCCCTCCTCCGAACCTGGTCAACTCAACAACCCCACCACCCCAAGCTCCCCAGGTCCCTCTCTCATCCCCTACCCCCCAAATCCGATGCCGCCATCTCCGATCCACCCACCCGAAACCTCATCGCCATTCCCGAACCGCCTCCGCCGCAGCGGCCGACGATCACCATTCCTGGGGCGGAGCAACGCGTCGTCGTGTACTTCACGAGCCTGCGGGTGGTGAGGTCGACGTTCGAGGATTGCAAGAGCGTGCGATCGATTCTGCAAGCGCTTCGGGTTACGGTGGACGAGCGAGATCTGTCGATGGACGTAGGGTTCATGAAGGAGCTACGGGAGATATTGGGGGACAGGAAGCTCACGCTCCCGCGCGTGTTCATCGACGGAAGGTACATCGGCGGCGCGGAGGAGGTCCGGCAGCTGAACGAGACCGGCGAGCTCAGGAAGATCGTGCAAGGCTTGCCCGCAGCGGATTTGGGGGTGTGTGACGTGTGCGGTGGATATAGGTTCATCCTGTGTGAAGAGTGTAATGGTAGCCGTAAGATGTACTCCGAGAAGGCTGGATTCAACACGTGTACGGTGTGTAATGAGAATGGCCTGATCAGCCTCTCTTCTAATTCCTCTCTCAACGCCcaagGTTTGGCGTTGTTAAAGTTGAAGGATAGAGTGATGAGAGATCCGTTTGGAGCTTTATCCAATTGGAATGCCCAACACACATACTACTACTCTACTCCTTGTTCATGCATTTTGCGCAATAACTCTTTCTCCGGAGAGATTCCCAAAGAGATATCACAACTAGAGGATCTGCAAGTACTTGACTTGGGATATAACAACTTTAGTGGTCAATTTCCTTCTCACATTGCTTCTATTCCATCTCTCACTACACTTTTACTGAACAACAATGACTATCTCACCAACCCAGCTCCACAAGCGTATGGAAAGAGGATTTCTGAATTTTATGGAAATAAAGATCAATCATCTGGCATATCACTTCCATCAAATCCACCTCAATCCAGTTGGATCTCAGGGCCTTCCCCTGCTTCAATTTGGAACCAAGAGTATACAAACAGTTCCAAGGCCCAAAAATTTGTGATCATTTGGTCTACTGCTGGAGGTGTATCCTTACTGGTTTTTGTGTCAGCCATAGCTTTCGCTTGCTTCCGAAACAGCAAGGTTGTCACTGTTAAGCCTTGGGTTACAGGTTTAAGTGGGCAGCTTCAAAAAGCTTTTGTGACAGGTGTGCCAAATCTGAGACGAGTAGAAATTGAAGCAGCTTGTGAAGATTTCAGCAACGTTATTGGTTCTATCCCAGAGGGGACTGTTTATAAAGGGACTCTCTCCAGTGGAATTGAGATAGCTGTAGCATCCTCTGCAATCACCTCATCTAGGAACTGGTCAAAAACTATGGAAGCTCAATTCAGAGAAAAGATAGAGACATTATCCAGGGTGAACCACAAGAACTTTGTGAATCTTATTGGGTATTGTGAAGAGAAGAAGCCTTTCACAAGAATGATGGTTTTTGAGTATGCTCCAAATGGAACCCTCTTTAGAGAAGCAGAGAGGCTAGACTGGAGAATGAGGGTGAGGATAACTATGGGAATAGCCTATTGTCTAGAACATATGCATCAGCTGGAACCACCCATTGCTCACAGAAACCTGCAATCTTCATCTATATACCTGACTGAAGATTATGCTGCTCAAATATCAGATCTTAGCTTCTGGAATGACATGACTACTATAAAGAAATTTTCAGCCAAGGGCAATGTTTATAGCTTTGGAGTTATACTGTTTGAGCTAATCACAGGGAGAATACCCTATGATGTGGAAAATGGATTTCTTGCAGAATACGTAAGAAGGGGACAGTCCTTGAGAGATATGGTGGATCCAACTCTGAACTCTATGAAAGAAGAAGAGGCAGAGAAATGGTGTGAAGTGATGAGAAAGTGTTTGCATGCAGATCCAGATAGAAGACCAGCTATGAGAGAGGTTGTTAATATGTTGAAGGAGATAACTGGAATGGGACCTGATGAAGCAACTCCAAAATTATCACCTCTTTGGTGGGCAGAACTTGAAATTATGTCCACGGATTCAACCTGA 2259 0.4697 MRHNVAAIIAHQAKFNSGNKGKGVTNPVFNNAGGPPQPSTPSCRKASIFHRVRAANSLLRTWSTQQPHHPKLPRSLSHPLPPKSDAAISDPPTRNLIAIPEPPPPQRPTITIPGAEQRVVVYFTSLRVVRSTFEDCKSVRSILQALRVTVDERDLSMDVGFMKELREILGDRKLTLPRVFIDGRYIGGAEEVRQLNETGELRKIVQGLPAADLGVCDVCGGYRFILCEECNGSRKMYSEKAGFNTCTVCNENGLISLSSNSSLNAQGLALLKLKDRVMRDPFGALSNWNAQHTYYYSTPCSCILRNNSFSGEIPKEISQLEDLQVLDLGYNNFSGQFPSHIASIPSLTTLLLNNNDYLTNPAPQAYGKRISEFYGNKDQSSGISLPSNPPQSSWISGPSPASIWNQEYTNSSKAQKFVIIWSTAGGVSLLVFVSAIAFACFRNSKVVTVKPWVTGLSGQLQKAFVTGVPNLRRVEIEAACEDFSNVIGSIPEGTVYKGTLSSGIEIAVASSAITSSRNWSKTMEAQFREKIETLSRVNHKNFVNLIGYCEEKKPFTRMMVFEYAPNGTLFREAERLDWRMRVRITMGIAYCLEHMHQLEPPIAHRNLQSSSIYLTEDYAAQISDLSFWNDMTTIKKFSAKGNVYSFGVILFELITGRIPYDVENGFLAEYVRRGQSLRDMVDPTLNSMKEEEAEKWCEVMRKCLHADPDRRPAMREVVNMLKEITGMGPDEATPKLSPLWWAELEIMSTDST 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2202 752 CDD GRX_GRX_like 118 255 - -
Sto9g2202 752 SUPERFAMILY Protein kinase-like (PK-like) 466 721 IPR011009 -
Sto9g2202 752 Gene3D Phosphorylase Kinase; domain 1 458 563 - -
Sto9g2202 752 ProSiteProfiles Protein kinase domain profile. 481 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2202 752 Gene3D Transferase(Phosphotransferase) domain 1 632 727 - -
Sto9g2202 752 PANTHER PROTEIN MALE DISCOVERER 2 384 751 - -
Sto9g2202 752 PANTHER PROTEIN MALE DISCOVERER 2 256 374 - -
Sto9g2202 752 MobiDBLite consensus disorder prediction 18 43 - -
Sto9g2202 752 Gene3D Ribonuclease Inhibitor 266 382 IPR032675 -
Sto9g2202 752 SUPERFAMILY Thioredoxin-like 115 205 IPR036249 -
Sto9g2202 752 Pfam Protein tyrosine and serine/threonine kinase 484 631 IPR001245 GO:0004672|GO:0006468
Sto9g2202 752 Pfam Protein tyrosine and serine/threonine kinase 635 721 IPR001245 GO:0004672|GO:0006468
Sto9g2202 752 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 384 751 - -
Sto9g2202 752 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 256 374 - -
Sto9g2202 752 Gene3D Transferase(Phosphotransferase) domain 1 565 631 - -
Sto9g2202 752 ProSiteProfiles Glutaredoxin domain profile. 107 212 - -
Sto9g2202 752 SUPERFAMILY L domain-like 303 368 - -
Sto9g2202 752 Pfam Glutaredoxin 120 186 IPR002109 -
Sto9g2202 752 MobiDBLite consensus disorder prediction 63 90 - -
Sto9g2202 752 Gene3D Glutaredoxin 114 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2202 Sto-Chr9 25663039 25673599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2202 304 734 Receptor kinase-like Gene Family AT5G65700 28.753 1.12e-37 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Sto9g2202 PK_Tyr_Ser-Thr 8.8e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2202 - - gmx:100814122 538.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2202 9 25663039 25673599 Sto5g4357 5 52232524 52233857 CCT
Sto9g2202 9 25663039 25673599 Sto9g2202 9 25663039 25673599 ECH
Sto9g2202 9 25663039 25673599 Sto5g4357 5 52232524 52233857 ECH