Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2200 ATGAGACGGATGCGTGACGGATGGTGGAGGCCCAAAAGGGACAATGAGTCGCCAATGATGACGGGAAATATTAAGTCTGAGATGGTGAACTTGATGGAGATTGAAGCTGCTTCTTCTGAAGTAGGGCAAATTCCAGTTCCACCAAAGGAATTGCCTTCTACCGATCTGAGTTTAGGATCACTTGGTTCTTATTTTGAAGCATCATGGCCACTGCAGAATCATGAAAATGAGAAGCTGCCTCCTCCTGCTGGAGATGCAATGATGGAAACGGATATGAATGTGTCTGATATTCCTCCTCAAGTTGACATGAATCTGGAGAACTTGACTCTTGATGATGAGGAGGTAGATGAGAGCCCTAACCCTCATGAACAAGGCCAAGCCATTGATTTGGACAAGAATCGGAAATTTTATCCCGACATGGATCCCAAGAGGCTGAAACGAATCCTGTCAAACCGTATTTCTGCTAAGAAATCCCGCaataagaaaaatcaatatatcGCTGACATGGAGAAGCAGGCAGAAATGTTGGAGAGTAAGATTGCCCATCTTTATCCACAAATTGCGGCGTTTCATAGGAAGCGACACTGCCTGCTGATTGAGAACCATCAAGTGAAATACCGAATGGCTGCTCTTGAAAAAGACAGGCTTAGGAAAGAAGATGAAATGGAAAGGGTGAAAGCTGAATTGAATATGCTGAAAGGAATCCACTGGAATAATAAAATGGAACAAGAAGTTCGAATGCAGGAGTCGATGATGCGTCGTTGGGGCTCTGACATGAAGCTAATGACCAATCCAACCCCTGGTACTCCTTCCCCCGTGGAACCAGTGCTTGACTCAAACTCAGGTGGAGCAGCTGTgagaattgaagaagaaaaatcAGAAGAGAGTGAAGCTGCTATTGCGAAGCTAAGGTACAAGGAGAAGGGGAAGGCCAAACTTTATGAGATCTGA 951 0.4364 MRRMRDGWWRPKRDNESPMMTGNIKSEMVNLMEIEAASSEVGQIPVPPKELPSTDLSLGSLGSYFEASWPLQNHENEKLPPPAGDAMMETDMNVSDIPPQVDMNLENLTLDDEEVDESPNPHEQGQAIDLDKNRKFYPDMDPKRLKRILSNRISAKKSRNKKNQYIADMEKQAEMLESKIAHLYPQIAAFHRKRHCLLIENHQVKYRMAALEKDRLRKEDEMERVKAELNMLKGIHWNNKMEQEVRMQESMMRRWGSDMKLMTNPTPGTPSPVEPVLDSNSGGAAVRIEEEKSEESEAAIAKLRYKEKGKAKLYEI 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2200 316 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 141 193 IPR004827 GO:0003700|GO:0006355
Sto9g2200 316 SUPERFAMILY Leucine zipper domain 143 197 IPR046347 GO:0003700|GO:0006355
Sto9g2200 316 MobiDBLite consensus disorder prediction 1 20 - -
Sto9g2200 316 MobiDBLite consensus disorder prediction 264 294 - -
Sto9g2200 316 Gene3D - 142 194 - -
Sto9g2200 316 PANTHER ACTIVATOR OF SPOMIN LUC3 115 264 - -
Sto9g2200 316 SMART brlzneu 139 203 IPR004827 GO:0003700|GO:0006355
Sto9g2200 316 Coils Coil 159 179 - -
Sto9g2200 316 Pfam Basic region leucine zipper 141 189 IPR004827 GO:0003700|GO:0006355
Sto9g2200 316 PANTHER BASIC LEUCINE ZIPPER 34 115 264 - -
Sto9g2200 316 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 146 161 IPR004827 GO:0003700|GO:0006355
Sto9g2200 316 CDD bZIP_plant_RF2 144 194 IPR044759 GO:0003700|GO:0006355
Sto9g2200 316 Coils Coil 199 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2200 Sto-Chr9 25651430 25656528 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2200 140 219 bZIP Transcription Factor Family AT2G42380 42.500 1.76e-15 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto9g2200 bZIP_2 6.6e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2200 - - jcu:105640724 106.686