Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2187 ATGTCTTGCTCCGTCGCCGTTTCCAATTCGCCGGTTTTCTCTCCTTcgtcttctctcttcttcagcAAGAAGAATTCCCAccctccctcttcttcttccccctgCTCGCCCTCCTCCTTCGGCTTTCGCCTATTCAACTCTCCGATTGGGTTTTCCAATTCCGCCTCTGCTTCTGCTCCTTCCTCTTCCCCCACCACCTCTCTCTTGAAGAGGAAGAGGCCCGCCAAGCTTGATATTCCCGCTATGCCTTCCACTTTTGCGTCTCCGGTGACGCCGTCGGTGGCTAGGGATTTCGTGGAGGTTGAAGGACAGGGGTTTTCTGTGTATTGCAAGAGGGGAAGGAAGGAGTACATGGAGGATCGTTACTCCGCTGCTGTTAATCTTCAAGGACAATCCAAGCAGGCTTTCTTTGGCATATTTGATGGGCATGGAGGAGCAAAAGCAGCAGAATTCGCTGCTCATAACTTAGAAAAGAATATCTTGCAAGAAGTGACCAGGAGGAGTCATGAAGAGGATGACATTgaggaggcagtgaagaatggTTACCTGACCACAGATTCTGAGTTTCTAAAACAGGACATCCGAGGTGGTTCATGCTGTGTAACAGCACTGATTAGGAATGGCAACCTTATTGTGTCCAATGCCGGTGATTGTCGTGCCGTCATTTGCAGAGGAGGCACTGCTGAGGCCCTCACATCGGATCACCGGCCGTCAAGGGAAGACGAGAGGGACAGAATTGAAGCCCTGGGTGGCTATGTTGATCTTTGCCATGGTGTTTGGAGGATCCAAAGTTCTCTAGCTGTGTCCCGAGGAATCGGAGATCGCCACCTGAAGCAATGGGTGACAGCAGAACCTGAGACTAAAGTTATCAAAATTGAACCTGAACATGACTTATTAATACTAGCTTCAGATGGATTATGGGACAAGGTTACTAATCAGGAAGCAGTGGATATTGCTCGATCTTTTTGCGTTGAGAGTGATAGACCACAGCCATTGTTGGCCTGTAAGAAGCTCGCAGATTTGTCGGTGTTGCGTGGCTCTCGTGATGACATAAGTGTTATGCTAATCAAGTTGGATCACTATGTATGA 1089 0.4573 MSCSVAVSNSPVFSPSSSLFFSKKNSHPPSSSSPCSPSSFGFRLFNSPIGFSNSASASAPSSSPTTSLLKRKRPAKLDIPAMPSTFASPVTPSVARDFVEVEGQGFSVYCKRGRKEYMEDRYSAAVNLQGQSKQAFFGIFDGHGGAKAAEFAAHNLEKNILQEVTRRSHEEDDIEEAVKNGYLTTDSEFLKQDIRGGSCCVTALIRNGNLIVSNAGDCRAVICRGGTAEALTSDHRPSREDERDRIEALGGYVDLCHGVWRIQSSLAVSRGIGDRHLKQWVTAEPETKVIKIEPEHDLLILASDGLWDKVTNQEAVDIARSFCVESDRPQPLLACKKLADLSVLRGSRDDISVMLIKLDHYV 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2187 362 ProSiteProfiles PPM-type phosphatase domain profile. 105 358 IPR001932 -
Sto9g2187 362 ProSitePatterns PPM-type phosphatase domain signature. 136 144 IPR000222 GO:0043169
Sto9g2187 362 SMART PP2C_4 99 356 IPR001932 -
Sto9g2187 362 CDD PP2Cc 104 358 IPR001932 -
Sto9g2187 362 PANTHER PROTEIN PHOSPHATASE 2C 3 361 IPR015655 GO:0004722|GO:0006470
Sto9g2187 362 SUPERFAMILY PP2C-like 103 359 IPR036457 -
Sto9g2187 362 SMART PP2C_SIG_2 118 358 IPR001932 -
Sto9g2187 362 Gene3D - 104 361 IPR036457 -
Sto9g2187 362 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN-RELATED 3 361 - -
Sto9g2187 362 Pfam Protein phosphatase 2C 107 351 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2187 Sto-Chr9 25544742 25546387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2187 1 362 PP2C-type Phosphatase Gene Family AT2G30020 57.935 8.71e-151 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2187 K17506 - gmx:100795728 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2187 9 25544742 25546387 Sto5g4345 5 52114544 52117323 CCT
Sto9g2187 9 25544742 25546387 Sto9g2187 9 25544742 25546387 ECH
Sto9g2187 9 25544742 25546387 Sto5g4345 5 52114544 52117323 ECH